Pseudomonas paraeruginosa PA7: PSPA7_2315
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Entry
PSPA7_2315 CDS
T00569
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pap
Pseudomonas paraeruginosa PA7
Pathway
pap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPA7_2315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pap03019
]
PSPA7_2315
03009 Ribosome biogenesis [BR:
pap03009
]
PSPA7_2315
Enzymes [BR:
pap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSPA7_2315
Messenger RNA biogenesis [BR:
pap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPA7_2315
Ribosome biogenesis [BR:
pap03009
]
Prokaryotic type
rRNA helicases
PSPA7_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
ABR83221
UniProt:
A6V3Q0
LinkDB
All DBs
Position
2368674..2370335
Genome browser
AA seq
553 aa
AA seq
DB search
MTQETVGFAALGIHPNVLAAITAVGYEEPSPIQAQSIPLILEGHDMIGQAQTGTGKTAAF
ALPLLSRIDPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGVVAVYGGAPMGPQLK
ALRQGAQILVATPGRLCDHLRRDEKLLATVQRLVLDEADEMLKLGFMDDLEVIFEALPES
RQTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHADQKAGSIQRLL
EVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIESLKDGSLDIVI
ATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVGEVRLPDPETVLEARLARLAASLSPLLESAVAQRGAVRDELCRRLDCDAETL
AAALLARLTAGKALDLESVRREQPLTPSAPRERAERGERPERSGERRPMAPPSEGRARCR
TALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEANLERLLTKLKDTRV
AGKALRLRRYRED
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggaaaccgtcggcttcgccgcgctcggtattcaccccaatgtgctcgcggca
atcaccgccgtaggctatgaagagccttcgcctatccaggctcaatcgattccgctgatc
ctcgaaggtcacgacatgattggccaggcgcagaccggcaccggcaagaccgccgccttc
gccctgccgctgctgtcgcgcatcgacccgagccgccgcgagccgcagatgctggtgctg
gtgccgacccgcgagctggccctgcaggtcgccaccgcctgcgaaacctattccaagcag
ttgccgggcgtcggcgtggtcgccgtctacggtggcgcacccatgggcccgcaactgaag
gccctgcgccagggcgcgcagatcctcgtcgctacccccggccgcctgtgcgatcacctg
cgccgcgacgagaagctgctggccaccgtccagcgcctggtgctcgacgaggccgacgag
atgctcaagctcggcttcatggacgatctcgaagtgatcttcgaggcgctgcccgagtcg
cgccagaccgtgctcttctcggcgaccctgccggcctccatccgtggcatcgccgagcgt
cacctgaagcagccgaagcacgtcaagatcgccgccaagacccagaccgtggcgcgcatc
gagcaggtccacctgatggtccatgccgaccagaaggccggttcgatccagcgcctgctg
gaagtcgagcagttcgacgcgctgatcgccttcgtccgcaccaagcaggccaccctcgac
tacgccgagctgctggagcgccagggctatcgtgccgccgcgctgaacggcgacatgccg
caggcccagcgcgagcgggtgatcgagtcgctgaaggacggctcgctggacatcgtcatc
gccaccgacgtcgccgcccgtggcctggacgtgccgcgcatcacccatgtactgaacatc
gacatgccgtacgatccggagtcctacgtgcaccgcatcggccgtaccggtcgtgccggc
cgcgagggccgcgccctgttgctggtgaccccgcgcgagcggcgcatgctgcaggtgatc
gagcgggtcaccgggcagaaggtcggcgaggttcgcctgccggaccccgagaccgtgctg
gaagcccgtctggcacgcctggccgcgagcctctcgccgctgctggagagcgccgtcgcg
cagcgcggcgcggtgcgcgacgaactctgccgccgcctggactgcgatgccgagaccctg
gccgccgcgctgctggcgcgcctgaccgccggcaaggcgctggacctggagtcggtgcgc
cgcgaacagccgctgaccccttcggcgccgcgtgagcgtgccgagcgcggtgagcgtccc
gagcgcagcggcgaacgccggccgatggcaccgccgagcgaaggccgggcccgctgccgc
accgccctgggcgcgcgcgacggcgtcgcggcgaagaacctgctgggcgcgatcctcaac
gagggcggcctgtcccgcgaggacatcggtcgtatccagatccgcgacaccttcagcctg
atcgagctgcccgaggccaacctcgagcgtttgctgaccaagctcaaggacacccgcgtc
gccggcaaggccctgcgcctgcgccgctatcgcgaggactga
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