KEGG   Pseudemcibacter aquimaris: KW060_09480
Entry
KW060_09480       CDS       T08836                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
paqi  Pseudemcibacter aquimaris
Pathway
paqi00230  Purine metabolism
paqi00240  Pyrimidine metabolism
paqi01100  Metabolic pathways
paqi01232  Nucleotide metabolism
Module
paqi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
paqi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:paqi00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    KW060_09480
   00240 Pyrimidine metabolism
    KW060_09480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paqi03400]
    KW060_09480
Enzymes [BR:paqi01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     KW060_09480
DNA repair and recombination proteins [BR:paqi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    KW060_09480
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN RuvA_C Mtb12_C
Other DBs
NCBI-ProteinID: WDU57429
LinkDB
Position
1992846..1996478
AA seq 1210 aa
MKIERNYTDANLGAYADIAFRKTDSEISNPNGEVVFGLKGFEVPNDWSQVASDIIAQKYF
RKAGVPACLKPVKEDGVPSWLWRHVADEEKLEKLPDDEKYGPETSAQQVFHRLAGTWTYW
GWKGNYFETESDASAFYDELVFMLASQMCAPNSPQWFNTGIHWAYGIDGPSQGHFYVDPN
TGDLTKSASAYEHPQPHACFIQGVNDDLVGDGGIMDLWTREARLFKYGSGTGSNFSNVRG
AGESLSGGGASSGLMSFLKIGDRSAGAIKSGGTTRRAAKMVIVDVDHPDIEDFINWKVVE
EQKVSALVTGSKVTEKHAKAIMAACHLDGLENACDPKENAELKTAILNARRDMVPENTIQ
RVIGFAKQGFTKIDFETYDTDWDSEAYMTVSGQNSNNTVRVTDAFMKAVDDDADWNLTNR
TNGEIFKTVKARDLWNDIGLSAWQCADPGLQFHTTINDWHTCPNSGEIRASNPCSEYMFL
DDTACNLASLNLMKFKTRDGEFDVKSFEHATRIWTIVLEISVMMAQFPSREIAMRSYEYR
TLGLGFANIGALIMSCGYGYDSVEGRALCGSISALMTGVSYKTSAEMAARLGAFPKFEDN
KTPMLQVIHNHRTAAWGKSYYKGLNIHPAPLDIKNCPFDDIAVAAGRAWDMALAYGEQHG
FRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRMVPEALKTLGY
SPKQIDEISRYAVGHGNLVNAPHINWDSLKAKGFANAQLDQLSGAIEDAFDITFAFNRYT
FGDEFCTDVLGISTEQLSNPSFNMLKELGFTKEQINAANEYAAGTFTLEGAPHLKDEHIA
IFDCANPCGKKGKRFLSAHSHIHMMAAAQPFISGAISKTINMPNDASVEDCMEAYTLSWK
LGLKANALYRDGSKLSQPLNAAILEEEEIEELPLHEKTKAVAEKIVERVIEQGPAKRRKL
PTRRKGYTQKATVGGHKVYLRSGEYDDGTLGEIFIDMHKEGAAFRSLMNNFAIALSIGLQ
YGVPLDEYVDAFTFTRFEPSGQVVGNDAIKMATSVLDYIFRELAVSYLGRTDLAHVVPDD
LMPDSMGSGDDDISDESSTAETGDALNRVIGLTSTGYVRKSNLYVLQQETVETTKKTKAL
KISEDTQIAVGAEEVQETVIIEHDDRSNQILEAKMKGYEGDGCAECGNFTMVRNGTCLKC
DTCGSTSGCS
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgaagatagaaagaaattatacagacgcgaacctcggtgcatatgccgatatagctttt
agaaaaacagacagcgaaattagcaatccaaacggcgaagtcgtatttggattaaaaggg
ttcgaagtcccaaatgactggagccaggttgcgtctgatatcatcgcgcaaaaatatttc
cgtaaagcgggcgtaccagcatgtctaaaacccgtcaaagaagacggtgttccaagctgg
ctttggcgccatgttgccgatgaagaaaaacttgaaaaattaccggatgatgaaaaatac
ggtccggaaacaagcgcacaacaagttttccaccgccttgccggtacatggacatattgg
ggatggaaaggcaattatttcgaaacagaaagtgatgccagtgccttttatgacgaactt
gtttttatgcttgcaagccagatgtgtgcgccaaattcaccgcaatggtttaacaccggt
attcattgggcatatggcattgatggcccgtcgcaaggacatttttatgttgatccaaat
acgggtgatctgaccaaatccgcaagcgcatatgaacatccgcaaccccatgcctgcttc
attcagggggtaaatgatgatcttgttggtgatggcggcatcatggacctatggacccgt
gaagcgcgcctgtttaaatatggttccggcacaggcagcaatttttccaatgtccgtggt
gcgggcgaaagcctttccggtggtggcgcatcatcagggcttatgagctttttaaaaatt
ggcgatagatcagctggtgcgattaaatccggcggcaccacaagacgtgctgcaaaaatg
gtaatcgttgatgttgatcatccggatatagaggatttcatcaactggaaagtggttgag
gaacaaaaagtatccgcccttgtcaccgggtcaaaggtcacagaaaaacatgcaaaggcg
ataatggcagcctgtcatttagatggacttgaaaatgcctgtgatccaaaagaaaatgcg
gaacttaaaaccgcgatccttaacgcacgccgtgatatggtaccggaaaacaccattcaa
cgtgtgattggttttgcaaaacaaggctttaccaaaattgattttgaaacctatgatacc
gattgggattcagaagcttatatgaccgtatcggggcaaaattccaataacaccgtgcgt
gtaaccgacgcatttatgaaagcggttgatgatgatgccgattggaaccttaccaaccgt
accaatggtgaaattttcaaaaccgtaaaggcacgtgacctttggaatgatatcggcctt
agcgcatggcaatgtgctgatccgggtttacagttccacaccaccatcaatgattggcac
acatgccctaacagtggtgaaatccgtgcatcgaacccttgttccgaatatatgttcctt
gatgacaccgcatgtaatctcgcgtcattaaatctgatgaaatttaaaacccgtgacggc
gaatttgacgttaaaagttttgaacatgctacacgtatctggacaatcgttcttgaaatt
tccgtgatgatggcacaattcccatcacgcgaaattgctatgcgcagttatgaataccgc
acgctaggtcttggctttgccaatattggtgcgctgattatgtcatgtgggtatggatat
gacagtgttgagggccgcgccctttgtggttcaatcagtgcactgatgactggggtcagt
tataaaacatcggcggaaatggcggcccgtcttggtgcatttccaaaatttgaagacaat
aaaacaccaatgctacaggtgatccataatcaccgaactgccgcatggggtaaatcatat
tataaggggttaaacatccaccctgccccgcttgatattaaaaattgcccgtttgatgat
attgcggttgcggcgggccgcgcatgggatatggcccttgcatatggtgaacaacacggg
tttagaaacgcacaagtttccgtgatagcaccaacaggcacaatcggcctggtgatggat
tgtgatacaacaggtattgaacctgatttcgcactggtgaaatttaaaaaacttgctggt
ggtggttatttcaaaatcatcaaccgaatggtacccgaagcacttaaaacgctgggttat
tcaccaaaacaaatcgatgaaatttccagatatgccgtcggacacggcaatcttgtaaac
gccccgcatatcaattgggacagtttaaaagcaaaaggatttgcaaacgcgcagcttgat
caattaagcggtgcgatcgaggatgcctttgacatcacgtttgcctttaaccgttataca
tttggtgatgaattttgcacagacgttcttggaattagcaccgaacagctatccaaccca
tcattcaacatgttgaaagaattgggctttactaaagaacaaattaacgccgccaatgaa
tatgcagccggtacctttacccttgaaggcgcgccacatttaaaagatgaacatatcgcc
atttttgattgcgcaaacccatgcggcaaaaaaggaaaacgtttcttaagcgcccacagc
catattcacatgatggcggcggcacaaccgtttatttccggtgcgatttccaaaacaatc
aatatgccgaatgatgcaagcgtcgaagattgcatggaagcatacaccctttcatggaaa
ctggggcttaaggcaaatgcgttataccgtgatggttcaaaattaagtcagccattaaac
gccgcaatccttgaggaagaggaaatcgaagaattaccgcttcatgaaaaaaccaaggcg
gtcgcggaaaaaatcgtcgaacgcgtgatagaacaaggcccggccaaacgccgcaaactg
ccaacccgccgtaagggttacacacaaaaagcaaccgttggcggccataaagtgtacctg
cgtagtggtgaatatgatgatggcacactcggtgaaatattcatcgacatgcataaagaa
ggcgccgcattccgaagcttaatgaataacttcgccatcgcattatccatcgggcttcag
tatggggtgccactggatgaatatgtggatgcctttacattcacgcggtttgagccatcc
ggtcaggtggtcggcaacgacgccattaaaatggcaacatcggttcttgattatattttc
cgtgaattggcggtgtcttatcttggtagaaccgacctcgcccatgtggtaccggatgac
cttatgcccgatagcatgggaagcggtgatgatgatatttccgatgaaagctccaccgcc
gaaaccggtgatgcgcttaaccgtgtcattggcctgaccagtaccgggtacgtcaggaaa
agtaatctttatgtgctgcaacaggaaaccgttgaaaccacaaaaaagacaaaagcactg
aaaatatccgaagacacgcaaatcgcagttggcgcagaagaagttcaagaaaccgtaatc
atcgaacatgatgaccgttcaaatcagatcctcgaagccaaaatgaaaggatacgaaggg
gacggatgcgccgaatgcggcaatttcaccatggtaaggaacggtacgtgccttaaatgt
gatacatgcggttccacaagcgggtgcagttaa

DBGET integrated database retrieval system