Phreatobacter aquaticus: E8L99_15790
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Entry
E8L99_15790 CDS
T09827
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
paqt
Phreatobacter aquaticus
Pathway
paqt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paqt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E8L99_15790 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqt03021
]
E8L99_15790 (rpoB)
03400 DNA repair and recombination proteins [BR:
paqt03400
]
E8L99_15790 (rpoB)
Enzymes [BR:
paqt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E8L99_15790 (rpoB)
Transcription machinery [BR:
paqt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E8L99_15790 (rpoB)
DNA repair and recombination proteins [BR:
paqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E8L99_15790 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCK87114
UniProt:
A0A4D7QPB6
LinkDB
All DBs
Position
3356992..3361128
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTFTGRKRFRKFFGKIREVATMPNLIEVQKSSYDQFLMVEEPKGGRSDEGLQAVFKSV
FPITDFSGSAMLEFVKYEFEPPKYDVDECRQRSMTFAAPLKVTLRLIVFDVDVDTGAKSV
KDIKEQDVYMGDIPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLYALGMDNEDILATFYNRIMVSKDK
KDGWRLPYDPARMRGFKSTTDMIDADTGEVVLEAGRKLAVREAKKLADKGLKALRITTEE
LAGRYLAEDMVNFKTGEIYAEAGDEITEKMLKLLGDVGYDDIPTLDIDHVSIGAYIRNTL
VVDKNMTREDALFDIYRVMRPGEPPTIDTAEAMFHSLFFDSERYDLSAVGRVKMNMRLDL
TAEDTVRILRKDDILAVVKTLVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRM
ERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIEAPY
RKVRDGRVTDEVIYLSAMEEGKYAVAQANAPIDKAGTFIEDLIICRQAGEVLLLPVDRVD
FMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAIVARD
SGAAIAARRTGVVDQVDATRIVIRATEDLDPSRSGVDIYRLMKFQRSNQNTCINQRPLVR
VGDIVKKGEILADGPSTDLGDLALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTSIH
IEEFAVAARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVAAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVTGTVVEVRVFNRHGVDKDERAMAIEREE
IERLAKDRDDEQAILDRNVYGRLAEMLEHKTGISGPKGFKKDTVLTRDILQEFPRGQWWA
FAVAEDALMAEIEAMRKQYDESKRRLEQRFLDKVEKLQRGDELPPGVMKEVKVFVAVKRK
IQPGDKMAGRHGNKGVVSRIVALEDMPFLEDGTSVDIVLNPLGVPSRMNVGQILETHLGW
AAAGLGKMVGEAYDSYMRSKDVKPLRATFDKIYGDDAQIAALDEPNLAELARNSRRGIHF
ATPVFDGAKEADIEKMLDTAGLKHSGQVTLFDGKTGDVFDRQVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELMSTKPVRSAEDDDLGRQQAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccttcaccggccgcaagcggttccgcaagttcttcggtaaaatcagggaa
gtggcgacgatgccgaacctcattgaggttcagaaatcgtcctacgaccagttcctgatg
gtcgaggaacccaagggcggacgctccgacgaggggctgcaagcggttttcaagtcggtt
ttcccgatcaccgacttctccggcagcgccatgctggaattcgtgaagtatgagttcgaa
ccgccgaaatacgacgttgacgagtgccgtcagcgctcgatgacctttgccgcgccgctc
aaggtgacgctgcgcctcatcgtgttcgatgtggacgtggataccggcgccaagtcggtc
aaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgtcgaacggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccgggc
gtgttcttcgaccacgacaagggcaagacccattcctcgggcaagctcctgttcgccgcc
cgcatcattccctatcgcggttcctggctcgacatcgagttcgacgccaaggacatcgtc
tatgcgcgtatcgaccgccgccggaagatcccggtgacgagcctgctctatgccctcggc
atggacaacgaggacattctcgcaaccttctacaaccgcatcatggtgtcgaaggacaag
aaggacggctggcgccttccctatgatcccgcccgtatgcgcggcttcaagtcgaccacc
gacatgatcgacgccgataccggcgaggtcgtgctcgaggccggtcgcaagctcgctgtc
cgcgaagccaagaagctcgccgacaagggcctgaaggctctgcgcatcaccaccgaggaa
ctggctggccgctacctcgccgaggacatggtcaacttcaagaccggtgagatctatgcc
gaagccggcgacgagatcaccgagaagatgctgaagctgctgggcgatgtcggctacgac
gacatcccgacgctcgacatcgatcacgtctcgatcggcgcctatatccgcaacaccctg
gtggtcgacaagaacatgacgcgtgaagacgcgctgttcgacatctatcgcgtgatgcgt
ccgggcgagccgccgaccatcgacacggccgaagccatgttccactcgctgttcttcgac
agcgagcgctatgacctgtcggccgtcggccgcgtcaagatgaacatgcgtctcgacctc
accgccgaggacaccgtgcgcatcctgcgcaaggacgacatcctggcggtcgtgaagacc
ctcgtcgaactccgcgacggcaagggcgagatcgacgacatcgaccatctcggcaatcgc
cgcgtgcgctcggtcggcgagctcatggagaaccagtaccgcgtcggcctgctccgcatg
gagcgcgccatcaaggagcgcatgtcgtcggtcgagatcgacaccgtcatgccgcaggac
ctgatcaacgccaagccggcggctgccgccgtgcgcgagttcttcggttcctcgcagctc
tcgcagttcatggaccagaccaatccgctgtcggaaatcacccacaagcgccgcctgtcg
gcccttggacccggtggtctgtcgcgtgagcgcgccggcttcgaggtgcgcgacgtgcat
ccgacgcattacggccgtatctgcccgatcgagacgccggaaggcccgaatatcggtctg
atcaactcgctggcgacctttgcccgcgtcaacaagtacggcttcatcgaggcgccctat
cgcaaggtgcgcgacggccgggttaccgatgaggtgatctatctctccgccatggaggag
gggaagtacgcggtcgcccaggcgaacgcccccatcgacaaggccggtaccttcatcgaa
gacctcatcatctgccgccaggccggtgaagttctgttgctgccggttgatcgcgtcgac
ttcatggacgtgtcgccgaagcagctcgtgtcggtcgcggcagcgctcatcccgttcctc
gagaacgatgacgccaaccgcgctctcatgggctcgaacatgcagcgtcaggccgtgccg
ctggtgcgcgccgatgcgccgttcgtcggcaccggcatggaagcgatcgtcgcccgcgac
tcgggcgctgcgattgcggcccgccgcaccggcgtcgtcgaccaggtggacgccacccgt
atcgttatccgcgcgaccgaggatctcgatcccagccgctcgggcgtcgacatctaccgc
ctgatgaagttccagcgttccaaccagaacacctgcatcaaccagcgtccgctggtgcgt
gtcggtgacatcgtcaagaagggcgagatcctggccgacggcccgtcgaccgatctcggc
gatctggcgctcggccgcaatgtgctcgtcgcgttcatgccgtggaatggctacaacttc
gaggactccatcctgctctccgagcggatcgtcaaggaggacgtgttcacctcgatccat
atcgaggagttcgcggtggccgcccgtgacaccaagctcggaccggaggaaatcacgcgc
gacattccgaacgtgtcggaagaagctctgaagaacctcgacgaagccggcatcgtctat
atcggcgcggaagtcgcagctggcgacattctcgtcggcaagatcacgccgaagggtgaa
agcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgaaaaggcctccgac
gttcgcgacacctcgctgcgcgtgcccccgggcgtgaccggcacggtcgtcgaagtccgc
gtgttcaaccgccacggcgtcgacaaggacgagcgtgccatggcgatcgagcgcgaggaa
atcgaacgcctcgccaaggaccgcgacgacgagcaggcgatcctcgaccgcaatgtctat
ggccgtctggccgagatgctggagcacaagaccggcatttccggtccgaagggcttcaag
aaggacacggttctcacccgcgacatcctgcaggaattcccccgcgggcagtggtgggcg
ttcgccgtcgccgaagacgccctcatggccgagatcgaggccatgcggaagcagtacgac
gagtccaagcgtcgcctcgagcagcgcttcctcgacaaggtcgagaagctgcagcgcggc
gacgagctgccgcccggcgtcatgaaggaagtcaaggtcttcgtggcggtgaagcgcaag
atccagccgggcgacaagatggccggccgtcacggcaacaagggtgtcgtgtccaggatc
gtggctctcgaggacatgccgttcctcgaggacggcacctcggtcgacatcgtgctgaac
ccgctcggcgtgccgagccgcatgaacgtcggtcagatcctcgaaacccatctgggctgg
gccgctgctggcctcggcaagatggtgggcgaggcctatgactcctacatgcgctccaag
gacgtgaagcctctgcgtgcgaccttcgacaagatctacggcgacgacgcccagatcgcg
gctctcgatgagccgaaccttgccgaactcgcccgcaactcgcgccgcggtatccacttc
gcgacccccgtcttcgacggtgcgaaggaagccgacatcgagaagatgctcgatacggcc
ggcctgaagcattcggggcaggtgacgctgttcgacggcaagaccggcgatgtgttcgac
cgtcaggtgacggttggctacatctacatgctgaagctccaccaccttgtggacgacaag
atccacgcccgttccatcggtccctactcgctcgtcacccagcagccgctgggcggcaag
gcgcagttcggtggccagcgcttcggcgaaatggaagtctgggctctggaggcctacggc
gccgcctacaccctgcaggaaatgctgacggtgaagtcggacgacgtggccggtcgtacc
aaggtctacgaggcgatcgtgcgcggcgacgacacgttcgaggcgggcatccccgagagc
ttcaacgtgctcgtcaaggaaatgcgctcgctcgggctcaatgtggagctcatgtcgacc
aagccggtccgctccgccgaggacgacgatctgggccgtcagcaggccgccgagtaa
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integrated database retrieval system
