Paraburkholderia aromaticivorans: CJU94_19065
Help
Entry
CJU94_19065 CDS
T05169
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03030
DNA replication
parb03430
Mismatch repair
parb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJU94_19065
03430 Mismatch repair
CJU94_19065
03440 Homologous recombination
CJU94_19065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parb03032
]
CJU94_19065
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_19065
Enzymes [BR:
parb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJU94_19065
DNA replication proteins [BR:
parb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJU94_19065
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJU94_19065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ASW00061
UniProt:
A0A248VM48
LinkDB
All DBs
Position
1:complement(4228555..4232136)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRLDDVVKAAAKDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNEEAARRNALHWAKVFPGGFYIELQRCGQP
GGEHYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRAKRFTS
EQYFRTQEEMAALFADIPSALANSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKEGLEKRLEQLYPDEAERATQRATYYERLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLAQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVESVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAE
HRELFRQGAAKNGLTAEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMAVLPPDVNLSAYRFEPVAEPDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREEGPFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDTLHANRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKNEVRRFVRQKIGELKEGRDKLVAGVIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNETFEAHKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSAGKDEPQAAAAPAASSRGGNGGGNGGGRNGGGYGGGGQRQA
VQIPNGLAVQVVYRSQNAEGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgttcatcttcgcgttcactccgaattctcgatt
gccgatggcatcgtgcgccttgacgacgtcgtcaaggcggctgccaaagacggccagggc
gcgctcgccctgaccgatctcggcaacgcattcggcctcgtccgtttctacaaggaagcc
cgtggcaaaggggtcaaacccattgccggctgcgacgtctggatcaccaatccggacgac
cgcgacaagccttcccgtttgttgctgctggtcaaagaccggcgcggctacctgaacctg
tgcgagctgctcagcaaggcgtcgctcacgaaccagtatcgtgggcgcgcggaagtcgag
gccggctggctcgaatccggcctgggcgaagggctgctcgcgttgtccggcgcgcagcag
ggcgatgtcggcctcgcgctcgcggcaggtaacgaagaagccgcgaggcgcaacgcgctc
cattgggcaaaggtgttcccgggcggcttttatatcgagttgcagcgctgcggtcagccg
ggcggcgagcattatgtgcagcaggcggtcgcactcgcggcgtcgctgaaattgccggtg
gtcgccacgcatcccatgcagttcatgacgccggacgacttcaccgcgcacgaagcgcgc
gtttgtatttccgaaggcgacatcctggccaatccgcgccgcgcgaagcgcttcacgtcg
gagcagtacttccgcacgcaggaagagatggccgcgctgttcgcggacattccgtcggcg
ctcgccaactcggtcgaaatcgccaagcgttgcaacctcacgctcgaactcggcaagccc
aagctgccgctgttccccactcccgacggcatgtcgctcgacgactacctcgtgcagctg
tcgaaagagggcctcgaaaagcgtctcgaacagctgtatccggacgaggctgagcgcgca
acgcagcgcgcgacgtactacgagcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttcccggctacttcctgatcgtggcggacttcatcaactgggcgaagaacaacggc
gtgccggtcgggccgggccggggctcgggcgccggttcgctggtcgcgtacgcgctcggc
gtgaccgacctcgatccgctgcgctacaacctgctgttcgaacgttttctgaatccggag
cgggtgtccatgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatc
cagtacgtgaaggaaaagtacggcgcggacgccgtgtcgcagatcgccacgttcggcacg
atggcggcgaaggcggcggtgcgcgacatcggccgcgtgctcgatctgggctacatgttc
acggacggcatcgccaagctgattccgttcaagccgggcaagcacgtcaccatcgcggac
gcgatgaaggaagagccgcttttgcaggagcgcttcgacaacgaagacgaagtgcatcag
ctgctcgaactcgcgcagcgcgtggaagggctcacgcgtaacgtcggcatgcacgcgggc
ggtgtgctgatcgcgccgggcaagctgaccgatttctgcccgctgtacacgcagggcgac
gaaagcggcgtggtgagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaag
ttcgactttttgggtctgaccacgctgacgattctcgactgggccgagcgctatatccgg
cgcctcgatccgtcgaagcaggactggtcgctcgcgcaggtgccgctcgacgacccggcg
tcgttctccattctgaagaaagcgaatacggtcgcggtgttccagctggaaagccgcggc
atgcagggcatgctgaaagacgcgcagcctgaccgcttcgaggacatcatcgcgctggtc
gcgttgtaccgtccgggcccgatggacctgattccgagcttctgcgcgcgtaagcacggc
cgcgaagtggtggaatatccggatccgcgtgtcgaatctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctg
ggcggcgccgacttgctgcgtcgcgcgatgggtaagaagaaggccgaggaaatggccgaa
catcgcgagttgttccgccagggcgccgcgaagaacggtctgaccgctgagaaggccgac
gaaatcttcgacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcgtatgcgctgctggcgtactacaccgcgtggctgaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgcttgccatggacgacacggacaaggtcaagatcctgttcgaa
gactgtctcgcgaacaagatggcggtgctgccgccggacgtcaatctgtccgcgtaccgc
ttcgagccggttgccgagcctgacggcaagcgttcgaaaaccatccgctacggcctcggt
gcaatcaagggcagcggccagaacgcgatcgaagaaatcctgcgcgcgcgtgaagaaggt
ccgttcatcgacatcttcgatttctgcaaccgggtcgaccgccgcatcgtcaatcgccgc
acggtcgaagcgttgatccgcgccggcgccttcgacaccttgcatgcgaatcgcgcgcaa
ctgatcgcgtccgtttcgctcgccatggaagccgccgagcaggcaagcgccaacgcgttg
caggcaggcctgttcgacatgggcgacgcgccgtcgcaaggtcacgagctggtcgacgag
ccggagtggccggaaaaaaagaagctgcaggaagagaaggccgcgctcggcttctatctg
tcgggccatctgttcgacgcctacaagaacgaagtgcgccgcttcgtgcgccagaagatc
ggcgagctgaaggaggggcgcgacaagctggtcgccggtgtgatcgcctcgctgcgcacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgacggcaccggccaatgc
gaagtcacggttttcaacgagacgttcgaggcgcacaagcaactgttcaaagaagacgaa
ctgctggtcgtgcagggtcaggcgcgtaacgacgcgtttacgggcggcatccgttttacc
gtcgacacggtcatggatctgggccgcgcgcgctgccgttatgcggaggccgtgaaggtg
cagatgaacggcaatgcggacgcgctggcattgcgccgtgtgctcgaagcgcatagcgcg
ggcaaggacgaacctcaggcggccgcggcgccggcggcttcatcgcgtggcggaaacggc
ggcggcaacggcggtggccgcaatggcggcggctacggcggcggtgggcagcgccaggcg
gtgcagatcccgaacgggctggccgtgcaggtggtctatcgcagccagaacgcggaaggt
gaaatgcgtctgggcgacgcatggcgcgtgaaaccgaccgacgaactgctcgcggcattg
cgtggcgagttcgccgggagctcgatcgagatcgtttattga
DBGET
integrated database retrieval system
