Paraburkholderia aromaticivorans: CJU94_32475
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Entry
CJU94_32475 CDS
T05169
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CJU94_32475 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_32475 (xth)
Enzymes [BR:
parb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CJU94_32475 (xth)
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CJU94_32475 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ASW02757
UniProt:
A0A248VUW2
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All DBs
Position
2:2888812..2889624
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AA seq
270 aa
AA seq
DB search
MARLRIATFNINGIRSRLPALLQWLERGAPDIVCLQELKAVDSAFPVEPLRDAGYGAIWQ
GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYLEAAVGGVLVACLYLPNGNPQPGPK
FDYKLAWFDHLIKHAAKLYKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERY
QRLLAQGWTDALRTHFGDARVYTFWDYFRRHWETNSGLRIDHLLLSAELAPRLRDAGVDR
WVRGEPHASDHAPAWVELEMGAARRKKSGA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggcttcgaatcgcgacgttcaacatcaacgggatccgctcgcgcttgcccgcg
ctgctgcaatggctcgaacgcggggcgcccgacattgtctgtttgcaggaactcaaggcg
gtggacagcgcgtttcccgtcgaacccttgcgcgacgccggctatggcgcgatctggcaa
gggcagagcgcatggaacggcgtggcgatcctgtccaaaggcgaggcgccgctggaaagc
cgccgcggcctgccgggattcgaggacgacacgcatagccgctatctcgaagccgccgtg
ggcggcgtgctggtggcatgcctctatctgccgaacggcaatccgcagcccggccccaaa
ttcgactacaagctggcgtggttcgaccatctgatcaagcacgcggcgaagctctataag
agcggccatccggtggtgctggcgggcgacttcaacgtggttcccaccgatgaagacatc
tacaatccgcgctcgtggctcaaagacgcgctgctgcaacccgagagccgcgaacgctat
cagcgtttgctcgcgcaaggctggaccgacgcgttgcgaacgcatttcggcgacgcacgg
gtgtacaccttctgggactatttccgccggcattgggagacgaattccggcttgcgcatc
gaccatctgctgctgagcgccgagctcgcgccgcgtttgcgcgacgccggtgtcgaccgc
tgggtgcggggagagccgcacgcgagcgaccatgcgccagcgtgggtggaactggagatg
ggcgcggcgcgccgcaagaaaagcggcgcatga
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