Parabacteroides sp. CT06: CI960_01720
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Entry
CI960_01720 CDS
T05011
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CI960_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_01720
Enzymes [BR:
parc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CI960_01720
DNA repair and recombination proteins [BR:
parc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CI960_01720
Prokaryotic type
CI960_01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AST52189
LinkDB
All DBs
Position
complement(436375..437037)
Genome browser
AA seq
220 aa
AA seq
DB search
MDVKIEESWKKRLADEFEKDYFKQLTDFVKQEYRQGTVYPPGPYMFNAFEHCPFDKVKVV
ILGQDPYHEPGQAHGLCFSVQDGVPFPPSLINIFKEIQDDLGHPVPTTGNLIRWADQGVL
LLNATLTVRAHQAGSHQNRGWETFTDAVIHRLAAERSHIVYILWGSYAQKKGAFIDSSRN
LVLKSAHPSPLSAYRGFFGNKHFSKANDYLIATGQTPIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaagattgaagaaagctggaaaaaacggttagccgacgagtttgaaaaagat
tatttcaagcaattgaccgatttcgttaaacaagaataccgccaaggtactgtttatcct
cccggtccttatatgttcaacgcttttgagcactgcccgttcgataaagtgaaggtcgtt
atcctcggccaagatccttatcacgagccgggacaggcgcacggactttgtttctccgtg
caggatggggtacctttccccccttccctcatcaatatattcaaagaaatacaagatgac
ttagggcatccggttccaacaaccggcaacttgattcgttgggcagatcaaggcgtatta
ctgctaaacgccacgctcacagtacgagcgcatcaagccggttcccatcaaaatagaggt
tgggagacctttaccgatgctgttattcatcgtctggcggctgaaagaagccatatcgtt
tacatattatggggttcctacgcacaaaagaaaggtgctttcatcgattcatcccgtaac
ctggttcttaaatcagcccatccgtccccactttccgcttaccggggattcttcggaaac
aagcatttcagcaaagccaatgattatttaatcgcaactgggcaaactcccatcgaatgg
taa
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