Pectobacterium aroidearum: I2D83_16205
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Entry
I2D83_16205 CDS
T07244
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00300
Lysine biosynthesis
pari01100
Metabolic pathways
pari01120
Microbial metabolism in diverse environments
pari01230
Biosynthesis of amino acids
Module
pari_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I2D83_16205 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pari01002
]
I2D83_16205 (dapE)
Enzymes [BR:
pari01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
I2D83_16205 (dapE)
Peptidases and inhibitors [BR:
pari01002
]
Metallo peptidases
Family M20
I2D83_16205 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QPI41985
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All DBs
Position
3612113..3613240
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AA seq
375 aa
AA seq
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MSCPVIELAQQLIKRPSLSPNDEGCQALMIERLTAMGFTVEAMDFGDTQNFWAWRGTGKT
LAFAGHTDVVPSGDESQWQHPPFEPIIRDGMLYGRGAADMKGSLAAMVIAAERFVAAHPN
HQGRLAFLITSDEEASAVNGTVKVVEALMARNERLDYCLVGEPSSTHVVGDVVKNGRRGS
ITANLRVHGVQGHVAYPHLADNPVHRAAPALNELIATEWDRGNDFFPPTTMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDVLIQQRVAELLDRHQLNYTIDWKLSGQPFLTARGEL
VDAVVNAVKHYNEVTPELLTNGGTSDGRFIARMGAQVVELGPVNATIHKVDECVSAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttgcccagtcatagagctcgctcaacagttaattaaacgcccttccctcagcccg
aacgacgagggctgccaggcgctcatgattgaacgcctgacggcgatgggctttaccgtc
gaagcaatggattttggcgatacccaaaatttctgggcatggcgcggcacaggaaaaacg
ctggccttcgccggacacactgacgtagtccccagcggagatgaaagccagtggcagcat
ccaccgtttgagccgatcattcgcgacggcatgctgtacggtcgtggcgcggcggacatg
aaaggttcactggccgcgatggtgattgccgccgagcgctttgtcgccgcccacccgaat
catcaagggcgtcttgcgtttctgattacctcggacgaagaagccagcgccgttaacggc
acggtaaaagtagttgaggcgctgatggcacgcaacgagcgattggactactgtctggtc
ggtgagccgtccagtacgcacgtcgtgggcgatgtggtaaaaaatggccgacgtggctcc
atcacagcgaacctgcgcgtacacggcgtacaggggcacgttgcctaccctcatctggcg
gacaaccctgttcatcgtgcagcaccagcgctgaacgagctgatcgccaccgaatgggat
cggggcaacgatttcttcccaccaaccaccatgcagattgccaatattcaggcaggcacc
ggcagcaataacgtcatccccggcgaactgtttgtgcagtttaatttccgtttcagcacc
gaattaacggatgtgttaatccagcagcgcgtcgcggaactgctggatcgccaccagctc
aattacaccattgactggaagctttccggccagccattcctgaccgcacgcggcgaactg
gtcgatgccgtggtaaatgccgtcaagcactacaatgaggttaccccagagctgctgacg
aatggtggcacttccgatggccgcttcatcgcacgtatgggcgcgcaggtggttgaactg
ggccccgttaatgccacgatccataaagtggacgaatgcgtcagcgccgcagatctgcaa
ctgctaagccgcatgtaccagcgcattatggagcagctcatcgcatga
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