Pseudoalteromonas arctica: PARC_a3047
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Entry
PARC_a3047 CDS
T05179
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
part
Pseudoalteromonas arctica
Pathway
part03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
part00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PARC_a3047 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
part03400
]
PARC_a3047 (mutS)
DNA repair and recombination proteins [BR:
part03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PARC_a3047 (mutS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ATC87469
UniProt:
A0A290S6D4
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Position
I:2985297..2987882
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AA seq
861 aa
AA seq
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MSFDLYAPHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQT
HRGKAGGDPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPATSKGPVDRKVVRIVTP
GTISDEALLQERQDNLLTSVWQSKKGLYGIAYLDINSGRFNVVEVNTDEAFSSTIQRLAP
AELLYSESFENFHLIEHIKGARRRPEWEFDLDTAQHLLCDQFGTKDLVGFGVDKAHSALV
AAGCLMQYVKDTQRIALPHIRAITLEHNEHAVILDAATRKNLELTVNLSGGFENTLAQVL
DKTATPMGSRLLKRRIHTPVRNKDELNSRLNAISAILDVQLCGELHESLKEIGDVERVIA
RLALCTARPRDLTRLRSALQALAPLHTLLGDANDPRITGIIKHSPELPDLQELLERAVIE
NPPVLIRDGGVIAPGYNSELDEWRNLSKGATDVLDQLELRERERTGISTLKIGYNRVHGF
FIEVSRANAHLVPADYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALALEKQLYEELFR
FIAPHIEQLQMMAAALADLDVLNNLAERAFALNYAKPELCDNDNISIKQGRHPVVEQVMK
EPFIANPVELNSQRKMLIITGPNMGGKSTYMRQTALIVLMAHIGSYVPADSAKIGNIDRI
FTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATAD
HLASKISAKTLFATHYFELTELAEQTTGLVNVHLDAIEHNDTIAFMHTVLDGAASKSFGL
QVAALAGVPKAVIAQAKQKLKLLENHQSVTAPNTEQQAFTFNNEAAQNTPSEVEEQLGAI
DPDNLSPRQAHDLLYKLKALL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatctttatgcaccacacactataaaacaacaaacccctatgatgcagcag
tatctaaaaataaaatcagagcatcgcgatattttattgttttatcgtatgggcgatttt
tacgaactcttttttgatgacgctaaacgcgccgctcaattactcgatatttcgcaaact
catcgcggtaaagccggtggcgatcctatccctatggcgggcgtaccttatcatgcagta
gaaaactacctagcacgcctagtccaaatgggtgaatcagtcgctatttgtgaacaagtg
ggtgaccctgcaactagtaaaggccctgtcgatcgtaaagttgttcgtatagttacacct
ggtacaatttctgatgaagcgcttttacaagaacgacaagacaatcttcttactagcgtt
tggcaaagtaaaaaaggtctgtacggtatcgcgtaccttgatattaactctggtcgcttt
aacgttgtagaggttaacaccgacgaagcctttagctcaactattcagcgcttagctccg
gcagaacttctgtatagcgaaagctttgaaaactttcatttaattgagcatataaaaggt
gcccgccgccgcccagagtgggagttcgacttagatacggctcagcacttattatgcgat
cagtttggtactaaagatttagttggttttggtgttgataaagcccacagcgcgcttgtt
gctgccggttgtttaatgcaatacgtaaaagatacacaacgtattgcactgccacatatt
cgtgcaattacgcttgagcacaacgaacacgctgttattttagatgccgcaacccgtaaa
aatttagaacttaccgttaatttatcaggtgggtttgaaaatacacttgcccaggtactt
gataaaacagcaacacctatgggctctcgtttacttaagcgccgtattcatacacctgta
cgtaataaagacgagctaaattcacgcttaaatgcaattagcgctattttagatgtacaa
ctgtgcggtgaattacacgaatcattaaaagagattggtgatgtagagcgagttattgca
cgcctagctttatgcacagctcgcccgcgcgatctaactcgtcttcgcagcgcattacaa
gcacttgcgccactacacactttgctaggtgatgctaacgatcctcgtattacaggtatt
atcaagcactcgcctgagctccctgatttacaagagttattagaacgtgcagtgatagaa
aacccaccggtacttattcgtgatggtggcgttatcgcccctggttacaacagcgaacta
gatgagtggcgtaacttaagtaaaggtgcaaccgacgtacttgatcaactagagttgcgt
gaacgcgaacgcacgggtattagtacgcttaaaattggttataaccgcgtacatggcttt
tttattgaagtaagccgcgctaatgctcacttagtgccagccgactacattcgtcgtcaa
acgctcaaaaataacgaacgctatattattcctgagcttaaagagcacgaagataaagta
cttggtagccaatcaaaagccttagcgcttgaaaagcaactatacgaagagctgttcaga
tttatcgctccacacattgaacagctgcaaatgatggcagcagcactggccgatttagac
gtattaaataacttggccgaacgtgcatttgcactcaattatgcaaaaccagaactgtgc
gataacgacaatataagcattaagcaaggtcgtcaccctgttgttgaacaagtaatgaaa
gaaccgtttattgctaaccctgttgaattaaacagccaacgtaaaatgttgattattacg
ggtccaaacatgggcggtaaatcaacctatatgcgccaaacagcacttattgtactaatg
gctcacattggcagttacgtacctgcagacagcgctaaaattggcaatattgatcgcata
tttacacgtattggtgcaagcgatgatttagcatcaggtcgctcgaccttcatggtagaa
atgaccgaaacagcgactattttaaataatgccacggcgcagtctttggtattaatggat
gaaattggtcgcggtacaagtacctacgatgggctttcgcttgcgtatgcaacagccgat
catttagcgtcaaaaatatcagctaaaacattgtttgcaacgcactactttgagttaaca
gaacttgctgaacaaacaacaggtctggtaaacgtgcacctcgatgcaatagaacataac
gatacaatcgcctttatgcatacagtacttgatggcgcagcaagtaagagctttggctta
caggtagctgctcttgcgggtgtgccaaaagctgttattgcacaagcaaagcaaaaactt
aagttactcgaaaatcatcaaagcgttactgcaccaaatacagagcaacaagcatttact
tttaataatgaagctgcacaaaatacaccttcagaagtggaagagcagttgggagctatt
gaccctgataatttatcgccacgccaagcgcacgatttattatataaactaaaagcattg
ttgtaa
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