Pyrobaculum arsenaticum: Pars_0986
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Entry
Pars_0986 CDS
T00503
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
pas
Pyrobaculum arsenaticum
Pathway
pas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pars_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pas03019
]
Pars_0986
03012 Translation factors [BR:
pas03012
]
Pars_0986
Messenger RNA biogenesis [BR:
pas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Pars_0986
Translation factors [BR:
pas03012
]
Eukaryotic type
Release factors
Pars_0986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
baeRF_family10
eRF1_1
eRF1_3
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
ABP50566
UniProt:
A4WJJ9
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All DBs
Position
complement(879137..880306)
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AA seq
389 aa
AA seq
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MSFNRPPNGVYYVKTATELRAFVNVLKKFRGYATTLITLYINSERPIPDVLNLLRSEWST
AANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAIFAGFHMINQGNYEWVYYVVVPPQ
PIYTFKYICDTAFHTEILEEQLHAAVTYGIVVVERGEAVIALLKGGQWEVVKTVEFFVPG
KHHAGGQSANRFKRQTEHLAETFYKVLAEEVNKIFLQIPTLKGIIVAGPGPTKEDFLEEG
GLDYRLKDKVLAVVPACCANEYGVVEAIRNAQDQLKESEYVKAKEVMDKVMFYAVKKSDY
IVYGRDRTLKALQMGMAELVVIAEELGEDVVLDVVMKAEEKGIKVEVIPKGVEESKTLMQ
AFGGYVALLSTPVWVLEQQIAAEAATTTS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaataggccgcctaatggcgtttactacgtaaagaccgccacggagctgagg
gcgtttgtgaatgtcttgaaaaagttccggggctacgccactaccctcattactttgtac
atcaactcggagcgtcctatccccgatgtgttgaatctgctaagatcggagtggtccacc
gcggctaacattaaagacaagacgactaggacgcacgtccaggacaccttggagaggatt
atcaacaacctcaagggcgaggctaaggctcctgaaaacggcatggccatcttcgcgggg
ttccacatgataaaccagggcaactacgagtgggtgtactacgtcgtggttccgccccag
cctatctatacgtttaaatacatctgcgacacggctttccacacggagatcttagaagag
caactacacgcagctgttacctacggcatagtggtagtggagagaggagaggcggtgatc
gcgttgctaaaaggcgggcagtgggaagttgttaagactgttgagttcttcgtgccgggg
aagcaccacgcaggaggacagtccgccaaccgctttaagcgccagacagagcacttagcc
gaaactttttacaaggtgctggctgaggaggttaacaagatattcttacagatccccacg
ctgaaggggatcatcgtggcggggcctgggcccacgaaggaggacttcttagaagagggg
ggcttggactaccgcctcaaggacaaggttctggccgttgtacctgcgtgctgcgccaac
gagtacggtgtggtggaggctattagaaacgcccaggaccagctcaaggagagcgaatac
gtcaaggcaaaggaggttatggacaaggtcatgttctacgccgttaagaaaagcgattac
attgtatatgggagggaccgaacgcttaaggcacttcagatgggaatggcggagctggtg
gtaatagccgaggaactcggcgaagacgtagttctcgacgtagtaatgaaggcggaggag
aagggaattaaagtagaagttataccaaagggcgtggaggagtccaagacgctgatgcag
gcatttggaggatacgtggcgcttctttcaacccccgtttgggttcttgagcaacaaatt
gcggcagaggccgccacaacaacgtcataa
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