Pseudomonas asiatica: LG197_10770
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Entry
LG197_10770 CDS
T08841
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi03410
Base excision repair
pasi03430
Mismatch repair
pasi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG197_10770 (recJ)
03430 Mismatch repair
LG197_10770 (recJ)
03440 Homologous recombination
LG197_10770 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_10770 (recJ)
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LG197_10770 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LG197_10770 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LG197_10770 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WDM90511
LinkDB
All DBs
Position
2355766..2357475
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRPLPPTLPFLGNLPPLLTRLYAARGVQSEAELDKSLARLLPYQQLKGIEAGVDLL
VEAIDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVDGVAAAKAAGLKVLVTDHHLPGAELPDADAIINPNQPGCSF
PSKALAGVGVIFYVLMALRARLRSLGRYETQPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALAQDMAQQLDDLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPHLISKFGG
HAMAAGLSLPEANFPAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgcccgctgccgcccaccctgccattcctgggtaacctgccaccc
ttgctgacccgcctgtacgccgcgcgcggcgtgcagagcgaggccgagctggacaaaagc
ctcgcgcgcctgctgccgtaccagcagctcaagggcatcgaggccggcgtggatctgctg
gtcgaggctatcgaccagcgccagcgcatcctcatcgtcggcgacttcgatgccgacggc
gccactgccagtactgtcggcgtgctgggcctgcgcctgctgggcgcggcccacgtcgac
taccttgtgcccaaccgcttcgagtacggctacggcctgaccccggagatcgtcgaggtg
gcgctgcaacgccagccgcagctgctgatcaccgtggacaatgggatttccagcgtcgac
ggtgtggcagccgccaaagccgccgggctcaaggtgctggtcaccgaccaccacctgccg
ggcgcggagttgcccgacgccgacgccatcatcaaccccaaccagccgggctgtagtttc
ccgagcaaggcgctggctggggtaggggtgatcttctacgtgctgatggccctgcgtgcg
cgtctgcgcagcctgggccgctatgaaacgcagccgcagccgaacatcggcgaattgctc
gacctggtggccctgggcagcgtcgcggacgtggtgccattggatgccaacaaccgcatc
ctggtgcaccagggcctcgaacgcattcgtgccggccgcgcccgaccggggctgaaggcc
attcttgaagtggcccgtcgcgatcatcggcgcatcacctcgactgacctcggcttcatc
cttggcccgcggctgaatgctgccgggcgcctggacgacatgagcctgggcatcgaatgc
ctgctgtgtgaagacgcggccctggcccaggacatggcccagcagctggacgacctgaac
caggaccgcaagtccatcgaacagggcatgcagcgcgaggccctggcccagctcaaggac
ctgcctgtcgagtcgatgccatatggcctgtgcctgttcgatgccgactggcaccagggg
gtaatcggtattctggcttcgcgcctgaaggagcgttaccaccggccgaccatcgctttt
gccgacgctggcgagggcatgctcaaagggtcggcgcgttcggtgccggggttccatatt
cgcgatgcgctggatgcggtggcggcgcgccacccgcacctgatcagcaaattcggcggc
cacgcgatggcggcggggttgtcgttgcccgaggccaatttcccggcatttgccgaggcg
ttcgatgaagaagtacgacgccagctgcgcgaagaggacctgaccggtcggctgttgtcc
gacggcagcctggcggtggaggagttccacctcgacctggccaaggccctgcgccatgcc
gggccctgggggcagcacttccccgagccgctgttccatggcgtgttccagctggtggag
caacgcgtggtgggcgagcggcacctgaaggtggtgctcaagagcgagtgcggctcggtg
cggttggacggcattgcctttggcattgaccgcgaagtgtggccgaacccgacggtgcgt
tgggtcgagctggcgtacaagctggatgtgaacgagtttcgtggtaatgaaagtgtgcag
ttgatgattgcccacatggagccccgttga
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