KEGG   Paraglaciecola sp. T6c: Patl_1556
Entry
Patl_1556         CDS       T00372                                 
Name
(GenBank) penicillin-binding protein 6, Serine peptidase, MEROPS family S11
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
pat  Paraglaciecola sp. T6c
Pathway
pat00550  Peptidoglycan biosynthesis
pat01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pat00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Patl_1556
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pat01002]
    Patl_1556
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pat01011]
    Patl_1556
Enzymes [BR:pat01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Patl_1556
Peptidases and inhibitors [BR:pat01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   Patl_1556
Peptidoglycan biosynthesis and degradation proteins [BR:pat01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   Patl_1556
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Peptidase_S13 CytoC_RC
Other DBs
NCBI-ProteinID: ABG40078
UniProt: A0A9J9EPG1
LinkDB
Position
complement(1860166..1861338)
AA seq 390 aa
MRNTKTFILAIFSCFSLSFFSHAASAAVIIPDAPSVSAKGFILVDFQTGKVIAEQNSDIQ
IPPASLTKMMTSYVIGKEIANGNIKDTDMVTISENAWAKNFPDSSKMFIEVGTQISVGDL
NRGIIVQSGNDACVAMAEHIAGSEDAFASMMNLHAEKLGMTSTHFVNSHGLQDADHYTTP
RDMATLARALITDVPNEYKVYSEKEFTYNNIKQYNRNGLLWDKSLNVDGIKTGHTSDAGY
SLVSSATQGDMRLIAVVMGADSERARKVENKKLLKYGFRFYETITPYQAGESFVSHRIFM
GDKETVDLGISQDTPITIPRGQSKNLEANFELDKKLEAPLAKGEVVGKLFLQLDGEDVAE
YPLVTLQEVKEGGMIDRLVDFVKLQLGFDS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgcgaaacaccaagacattcatattagccatctttagctgcttctccctttcctttttc
tctcatgcggcgagtgcagcggtcatcatacctgacgcgccttccgtatcggctaaaggc
tttattttagtcgactttcaaaccggcaaggtgattgctgagcaaaattctgatattcag
ataccgccagcaagcttgactaaaatgatgacaagctacgtgatcggcaaagagatcgcc
aatggcaatattaaagacactgacatggtcacgatttcagaaaatgcttgggccaagaac
tttcctgattcatctaagatgtttatcgaagtgggtacacaaatttcggtgggcgactta
aatcgcggcatcattgtacagtcgggaaatgatgcatgcgtggcgatggcagagcacatt
gccggtagtgaagatgcgtttgccagcatgatgaatttgcacgctgaaaagttaggcatg
acgtcaacgcactttgtaaacagccatggcttacaagatgccgaccattacacgacccct
cgggatatggcgaccttagcccgcgcattgatcacagatgtgccaaatgagtataaggtt
tatagcgaaaaagagtttacctacaacaacatcaagcaatataaccgtaacggtttattg
tgggataaaagcctgaatgtggatggcataaagacgggccacacctcagatgcaggttat
agcttggtgtcctcagcgacccaaggcgatatgcgtttaatcgcggtggtcatgggcgct
gatagcgagcgtgcacgtaaagttgaaaacaaaaagctccttaagtatgggtttagattc
tatgaaactatcaccccgtatcaggcaggcgaaagctttgtatcacaccgcatatttatg
ggcgacaaagagactgtagatcttggtatttcacaagacacccccattactattcctcgc
ggtcagagcaaaaatttagaagccaacttcgagctagataagaagttagaagcacctttg
gctaaaggtgaagtagttggaaagttattcttgcaattagacggtgaagacgtagccgaa
tatcctttggttacattacaagaagtaaaagaaggcggtatgattgaccgccttgtagac
ttcgttaaactgcaacttggctttgatagctaa

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