Paraglaciecola sp. T6c: Patl_1556
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Entry
Patl_1556 CDS
T00372
Name
(GenBank) penicillin-binding protein 6, Serine peptidase, MEROPS family S11
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00550
Peptidoglycan biosynthesis
pat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Patl_1556
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pat01002
]
Patl_1556
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pat01011
]
Patl_1556
Enzymes [BR:
pat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Patl_1556
Peptidases and inhibitors [BR:
pat01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Patl_1556
Peptidoglycan biosynthesis and degradation proteins [BR:
pat01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Patl_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
ABG40078
UniProt:
A0A9J9EPG1
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All DBs
Position
complement(1860166..1861338)
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AA seq
390 aa
AA seq
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MRNTKTFILAIFSCFSLSFFSHAASAAVIIPDAPSVSAKGFILVDFQTGKVIAEQNSDIQ
IPPASLTKMMTSYVIGKEIANGNIKDTDMVTISENAWAKNFPDSSKMFIEVGTQISVGDL
NRGIIVQSGNDACVAMAEHIAGSEDAFASMMNLHAEKLGMTSTHFVNSHGLQDADHYTTP
RDMATLARALITDVPNEYKVYSEKEFTYNNIKQYNRNGLLWDKSLNVDGIKTGHTSDAGY
SLVSSATQGDMRLIAVVMGADSERARKVENKKLLKYGFRFYETITPYQAGESFVSHRIFM
GDKETVDLGISQDTPITIPRGQSKNLEANFELDKKLEAPLAKGEVVGKLFLQLDGEDVAE
YPLVTLQEVKEGGMIDRLVDFVKLQLGFDS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaccaagacattcatattagccatctttagctgcttctccctttcctttttc
tctcatgcggcgagtgcagcggtcatcatacctgacgcgccttccgtatcggctaaaggc
tttattttagtcgactttcaaaccggcaaggtgattgctgagcaaaattctgatattcag
ataccgccagcaagcttgactaaaatgatgacaagctacgtgatcggcaaagagatcgcc
aatggcaatattaaagacactgacatggtcacgatttcagaaaatgcttgggccaagaac
tttcctgattcatctaagatgtttatcgaagtgggtacacaaatttcggtgggcgactta
aatcgcggcatcattgtacagtcgggaaatgatgcatgcgtggcgatggcagagcacatt
gccggtagtgaagatgcgtttgccagcatgatgaatttgcacgctgaaaagttaggcatg
acgtcaacgcactttgtaaacagccatggcttacaagatgccgaccattacacgacccct
cgggatatggcgaccttagcccgcgcattgatcacagatgtgccaaatgagtataaggtt
tatagcgaaaaagagtttacctacaacaacatcaagcaatataaccgtaacggtttattg
tgggataaaagcctgaatgtggatggcataaagacgggccacacctcagatgcaggttat
agcttggtgtcctcagcgacccaaggcgatatgcgtttaatcgcggtggtcatgggcgct
gatagcgagcgtgcacgtaaagttgaaaacaaaaagctccttaagtatgggtttagattc
tatgaaactatcaccccgtatcaggcaggcgaaagctttgtatcacaccgcatatttatg
ggcgacaaagagactgtagatcttggtatttcacaagacacccccattactattcctcgc
ggtcagagcaaaaatttagaagccaacttcgagctagataagaagttagaagcacctttg
gctaaaggtgaagtagttggaaagttattcttgcaattagacggtgaagacgtagccgaa
tatcctttggttacattacaagaagtaaaagaaggcggtatgattgaccgccttgtagac
ttcgttaaactgcaacttggctttgatagctaa
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