KEGG   PATHWAY: osa01100
Entry
osa01100                    Pathway                                
Name
Metabolic pathways - Oryza sativa japonica (Japanese rice) (RefSeq)
Class
Pathway map
osa01100  Metabolic pathways
osa01100

Module
osa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:osa01100]
osa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:osa01100]
osa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:osa01100]
osa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:osa01100]
osa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:osa01100]
osa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:osa01100]
osa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:osa01100]
osa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:osa01100]
osa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:osa01100]
osa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:osa01100]
osa_M00012  Glyoxylate cycle [PATH:osa01100]
osa_M00015  Proline biosynthesis, glutamate => proline [PATH:osa01100]
osa_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:osa01100]
osa_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:osa01100]
osa_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:osa01100]
osa_M00021  Cysteine biosynthesis, serine => cysteine [PATH:osa01100]
osa_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:osa01100]
osa_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:osa01100]
osa_M00026  Histidine biosynthesis, PRPP => histidine [PATH:osa01100]
osa_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:osa01100]
osa_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:osa01100]
osa_M00034  Methionine salvage pathway [PATH:osa01100]
osa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:osa01100]
osa_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:osa01100]
osa_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:osa01100]
osa_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:osa01100]
osa_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:osa01100]
osa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:osa01100]
osa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:osa01100]
osa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:osa01100]
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:osa01100]
osa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:osa01100]
osa_M00055  N-glycan precursor biosynthesis [PATH:osa01100]
osa_M00072  N-glycosylation by oligosaccharyltransferase [PATH:osa01100]
osa_M00073  N-glycan precursor trimming [PATH:osa01100]
osa_M00081  Pectin degradation [PATH:osa01100]
osa_M00082  Fatty acid biosynthesis, initiation [PATH:osa01100]
osa_M00083  Fatty acid biosynthesis, elongation [PATH:osa01100]
osa_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:osa01100]
osa_M00087  beta-Oxidation [PATH:osa01100]
osa_M00089  Triacylglycerol biosynthesis [PATH:osa01100]
osa_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:osa01100]
osa_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:osa01100]
osa_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:osa01100]
osa_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:osa01100]
osa_M00098  Acylglycerol degradation [PATH:osa01100]
osa_M00100  Sphingosine degradation [PATH:osa01100]
osa_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:osa01100]
osa_M00113  Jasmonic acid biosynthesis [PATH:osa01100]
osa_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:osa01100]
osa_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:osa01100]
osa_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:osa01100]
osa_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:osa01100]
osa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:osa01100]
osa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:osa01100]
osa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:osa01100]
osa_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:osa01100]
osa_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:osa01100]
osa_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:osa01100]
osa_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:osa01100]
osa_M00166  Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P [PATH:osa01100]
osa_M00167  Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P [PATH:osa01100]
osa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:osa01100]
osa_M00169  CAM (Crassulacean acid metabolism), light [PATH:osa01100]
osa_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:osa01100]
osa_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:osa01100]
osa_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:osa01100]
osa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:osa01100]
osa_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:osa01100]
osa_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:osa01100]
osa_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:osa01100]
osa_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:osa01100]
osa_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:osa01100]
osa_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:osa01100]
osa_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:osa01100]
osa_M00532  Photorespiration [PATH:osa01100]
osa_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:osa01100]
osa_M00555  Betaine biosynthesis, choline => betaine [PATH:osa01100]
osa_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:osa01100]
osa_M00844  Arginine biosynthesis, ornithine => arginine [PATH:osa01100]
osa_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:osa01100]
osa_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:osa01100]
osa_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:osa01100]
osa_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:osa01100]
osa_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:osa01100]
osa_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:osa01100]
osa_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:osa01100]
osa_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:osa01100]
osa_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:osa01100]
osa_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:osa01100]
osa_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:osa01100]
osa_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:osa01100]
osa_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:osa01100]
osa_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:osa01100]
osa_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:osa01100]
osa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:osa01100]
Organism
Oryza sativa japonica (Japanese rice) (RefSeq) [GN:osa]
Related
pathway
osa00010  Glycolysis / Gluconeogenesis
osa00020  Citrate cycle (TCA cycle)
osa00030  Pentose phosphate pathway
osa00040  Pentose and glucuronate interconversions
osa00051  Fructose and mannose metabolism
osa00052  Galactose metabolism
osa00053  Ascorbate and aldarate metabolism
osa00061  Fatty acid biosynthesis
osa00062  Fatty acid elongation
osa00071  Fatty acid degradation
osa00073  Cutin, suberine and wax biosynthesis
osa00100  Steroid biosynthesis
osa00130  Ubiquinone and other terpenoid-quinone biosynthesis
osa00190  Oxidative phosphorylation
osa00195  Photosynthesis
osa00196  Photosynthesis - antenna proteins
osa00220  Arginine biosynthesis
osa00230  Purine metabolism
osa00232  Caffeine metabolism
osa00240  Pyrimidine metabolism
osa00250  Alanine, aspartate and glutamate metabolism
osa00260  Glycine, serine and threonine metabolism
osa00261  Monobactam biosynthesis
osa00270  Cysteine and methionine metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00290  Valine, leucine and isoleucine biosynthesis
osa00300  Lysine biosynthesis
osa00310  Lysine degradation
osa00330  Arginine and proline metabolism
osa00340  Histidine metabolism
osa00350  Tyrosine metabolism
osa00360  Phenylalanine metabolism
osa00380  Tryptophan metabolism
osa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
osa00402  Benzoxazinoid biosynthesis
osa00410  beta-Alanine metabolism
osa00430  Taurine and hypotaurine metabolism
osa00440  Phosphonate and phosphinate metabolism
osa00450  Selenocompound metabolism
osa00460  Cyanoamino acid metabolism
osa00470  D-Amino acid metabolism
osa00480  Glutathione metabolism
osa00500  Starch and sucrose metabolism
osa00510  N-Glycan biosynthesis
osa00511  Other glycan degradation
osa00513  Various types of N-glycan biosynthesis
osa00514  Other types of O-glycan biosynthesis
osa00520  Amino sugar and nucleotide sugar metabolism
osa00531  Glycosaminoglycan degradation
osa00561  Glycerolipid metabolism
osa00562  Inositol phosphate metabolism
osa00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
osa00564  Glycerophospholipid metabolism
osa00565  Ether lipid metabolism
osa00590  Arachidonic acid metabolism
osa00591  Linoleic acid metabolism
osa00592  alpha-Linolenic acid metabolism
osa00600  Sphingolipid metabolism
osa00601  Glycosphingolipid biosynthesis - lacto and neolacto series
osa00603  Glycosphingolipid biosynthesis - globo and isoglobo series
osa00604  Glycosphingolipid biosynthesis - ganglio series
osa00620  Pyruvate metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00640  Propanoate metabolism
osa00650  Butanoate metabolism
osa00660  C5-Branched dibasic acid metabolism
osa00670  One carbon pool by folate
osa00710  Carbon fixation in photosynthetic organisms
osa00730  Thiamine metabolism
osa00740  Riboflavin metabolism
osa00750  Vitamin B6 metabolism
osa00760  Nicotinate and nicotinamide metabolism
osa00770  Pantothenate and CoA biosynthesis
osa00780  Biotin metabolism
osa00785  Lipoic acid metabolism
osa00790  Folate biosynthesis
osa00860  Porphyrin metabolism
osa00900  Terpenoid backbone biosynthesis
osa00902  Monoterpenoid biosynthesis
osa00903  Limonene and pinene degradation
osa00904  Diterpenoid biosynthesis
osa00905  Brassinosteroid biosynthesis
osa00906  Carotenoid biosynthesis
osa00908  Zeatin biosynthesis
osa00909  Sesquiterpenoid and triterpenoid biosynthesis
osa00910  Nitrogen metabolism
osa00920  Sulfur metabolism
osa00940  Phenylpropanoid biosynthesis
osa00941  Flavonoid biosynthesis
osa00942  Anthocyanin biosynthesis
osa00944  Flavone and flavonol biosynthesis
osa00950  Isoquinoline alkaloid biosynthesis
osa00960  Tropane, piperidine and pyridine alkaloid biosynthesis
osa00965  Betalain biosynthesis
osa00966  Glucosinolate biosynthesis
osa00999  Biosynthesis of various plant secondary metabolites
osa01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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