KEGG   PATHWAY: osa03060
osa03060                    Pathway                                
Protein export - Oryza sativa japonica (Japanese rice) (RefSeq)
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Genetic Information Processing; Folding, sorting and degradation
Pathway map
osa03060  Protein export

Other DBs
GO: 0043952 0043953
Oryza sativa japonica (Japanese rice) (RefSeq) [GN:osa]
4349143  mitochondrial inner membrane protein OXA1-like [KO:K03217]
4334759  ALBINO3-like protein 1, chloroplastic isoform X1 [KO:K03217]
4324524  inner membrane protein PPF-1, chloroplastic isoform X1 [KO:K03217]
4331399  mitochondrial inner membrane protein OXA1-like [KO:K03217]
4349987  protein translocase subunit SECA2, chloroplastic isoform X1 [KO:K03070] [EC:]
4327279  protein translocase subunit SECA1, chloroplastic [KO:K03070] [EC:]
4339274  signal recognition particle 54 kDa protein 2 [KO:K03106] [EC:]
4324712  signal recognition particle 54 kDa protein 2 [KO:K03106] [EC:]
4349809  signal recognition particle 54 kDa protein, chloroplastic [KO:K03106] [EC:]
9267495  signal recognition particle 54 kDa protein, chloroplastic [KO:K03106] [EC:]
4325387  cell division protein FtsY homolog, chloroplastic [KO:K03110]
4346811  protein transport protein Sec61 subunit alpha [KO:K10956]
4332042  protein transport protein Sec61 subunit alpha [KO:K10956]
4345097  preprotein translocase subunit SECY, chloroplastic [KO:K10956]
4346809  protein transport protein Sec61 subunit alpha [KO:K10956]
4347548  protein transport protein Sec61 subunit alpha isoform 2 [KO:K10956]
107276128  protein transport protein Sec61 subunit alpha-like [KO:K10956]
107276600  protein transport protein Sec61 subunit alpha-like 1 [KO:K10956]
4327929  protein transport protein Sec61 subunit beta [KO:K09481]
9271333  protein transport protein Sec61 subunit beta [KO:K09481]
9266625  protein transport protein Sec61 subunit beta [KO:K09481]
9269540  protein transport protein Sec61 subunit beta [KO:K09481]
4328492  protein transport protein Sec61 subunit gamma [KO:K07342]
4341707  protein transport protein Sec61 subunit gamma-like [KO:K07342]
4329219  uncharacterized protein LOC4329219 [KO:K12275]
4335435  dnaJ protein ERDJ2A [KO:K09540]
4328075  luminal-binding protein 3 [KO:K09490] [EC:]
4339788  luminal-binding protein [KO:K09490] [EC:]
4338866  luminal-binding protein 2 [KO:K09490] [EC:]
4333877  luminal-binding protein 4 [KO:K09490] [EC:]
4340470  luminal-binding protein 4 [KO:K09490] [EC:]
9266859  uncharacterized protein LOC9266859 [KO:K09490] [EC:]
4344882  luminal-binding protein 2 [KO:K09490] [EC:]
4338568  luminal-binding protein 2 [KO:K09490] [EC:]
107275251  luminal-binding protein 5-like [KO:K09490] [EC:]
4340680  signal recognition particle 9 kDa protein [KO:K03109]
4337050  signal recognition particle 14 kDa protein isoform X1 [KO:K03104]
4324904  signal recognition particle subunit SRP72 [KO:K03108]
4345269  signal recognition particle subunit SRP68 isoform X1 [KO:K03107]
4340957  signal recognition particle 19 kDa protein [KO:K03105]
4345847  signal recognition particle receptor subunit alpha [KO:K13431]
4346082  signal recognition particle receptor subunit beta [KO:K12272]
4324478  sec-independent protein translocase protein TATC, chloroplastic [KO:K03118]
4328965  chloroplast processing peptidase isoform X1 [KO:K03100] [EC:]
4347239  thylakoidal processing peptidase 1, chloroplastic [KO:K03100] [EC:]
4352133  probable signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
4335967  probable signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
4329702  probable signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
4347817  signal peptidase complex subunit 3B [KO:K12948] [EC:3.4.-.-]
4325792  probable signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
4338334  signal peptidase complex catalytic subunit SEC11A [KO:K13280] [EC:]
4340738  signal peptidase complex catalytic subunit SEC11A [KO:K13280] [EC:]
4331226  signal peptidase complex catalytic subunit SEC11A isoform X1 [KO:K13280] [EC:]
107280467  signal peptidase complex catalytic subunit SEC11A-like [KO:K13280] [EC:]
4350939  mitochondrial inner membrane protease subunit 1 isoform X1 [KO:K09647] [EC:3.4.21.-]
4335047  mitochondrial inner membrane protease subunit 2 [KO:K09648] [EC:3.4.21.-]
9271486  mitochondrial inner membrane protease subunit 2 [KO:K09648] [EC:3.4.21.-]
Dalbey RE, Robinson C.
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
Trends Biochem Sci 24:17-22 (1999)
Berks BC, Sargent F, Palmer T.
The Tat protein export pathway.
Mol Microbiol 35:260-74 (2000)
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
J Biol Chem 275:16717-22 (2000)
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
J Biol Chem 275:41350-7 (2000)
Rapoport TA
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
Nature 450:663-9 (2007)
Flower AM
The SecY translocation complex: convergence of genetics and structure.
Trends Microbiol 15:203-10 (2007)
Osborne AR, Rapoport TA, van den Berg B
Protein translocation by the Sec61/SecY channel.
Annu Rev Cell Dev Biol 21:529-50 (2005)
Paetzel M, Karla A, Strynadka NC, Dalbey RE
Signal peptidases.
Chem Rev 102:4549-80 (2002)
Paetzel M, Dalbey RE, Strynadka NC
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
Pharmacol Ther 87:27-49 (2000)
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
Archaeal signal peptidases.
Microbiology 153:305-14 (2007)
Desvaux M, Hebraud M, Talon R, Henderson IR
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
Trends Microbiol 17:139-45 (2009)
Nakatogawa H, Murakami A, Ito K
Control of SecA and SecM translation by protein secretion.
Curr Opin Microbiol 7:145-50 (2004)
KO pathway

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