Pectobacterium atrosepticum 21A: GZ59_41240
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Entry
GZ59_41240 CDS
T03293
Symbol
pelB
Name
(GenBank) pectate lyase II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00040
Pentose and glucuronate interconversions
pato01100
Metabolic pathways
pato02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GZ59_41240 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_41240 (pelB)
Enzymes [BR:
pato01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GZ59_41240 (pelB)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF834
Motif
Other DBs
NCBI-ProteinID:
AIK15828
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Position
4439957..4441081
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AA seq
374 aa
AA seq
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MKYLLPTAATGLLLLAAQPAVAANTGGYATTDGGETSGAVKKTARSLQEIVDIIEAAKVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITILGTNGS
SANFGVWIVNSSDVVVRNMRFGYMPGGAQDGDAIRVDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNTDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNVTKPADFSKYNITWGRPSTPHVNADDWKNTGKFPSISYKYSPVSAQCVKDKLANYAG
VSKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccactggattgttattactcgcggctcagccagcg
gtggcagcaaatacgggcggctatgccaccacagatggtggagaaacttccggcgccgtg
aaaaaaaccgcacgttctttgcaagaaattgtggatattattgaagctgcgaaagtggat
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcatcatcacctataacggtaat
gaagattcattaatcaaagcagctgaaaagaatatttgcggccagtggagtaaggatgct
cgcggcgtacaaatcaaagagttcaccaaagggattaccatcctcggtaccaatggttca
tcggccaacttcggtgtctggatcgtgaactcctctgacgtcgtcgtacgtaatatgcgc
ttcggctatatgccgggcggtgcgcaagacggtgacgccattcgtgttgataactctcca
aacgtctggattgaccacaatgagatctttgccaagaactttgagtgtaaaggcacgcca
gacaatgacacgacttttgaatcggccgtcgatatcaagaaaggctcaactaacgtcacg
gtatcctacaactacattcatggcatcaagaaagtcggcctaagcggcgcaagcaatacg
gatacaggacgcaatctgacttaccatcacaatatctatcgcgatgttaactcacgtctg
ccgctacagcgtggtggtctggttcatgcttacaacaacctgtatgacggtatcactggc
tccggctttaacgtccgtcagaaagggatagcgttgatcgaaagcaactggttcgaaaat
gcgctcaacccggtgactgcacgtaacgacagctccaacttcggtacctgggagttgcgt
aacaacaacgtcacaaaaccggcagacttctccaaatacaacatcacctggggtcgtcct
tccacgcctcacgtcaatgctgatgattggaaaaacaccggcaagttcccttccatttct
tacaaatactccccagtttcggcacagtgtgtgaaagataagctggcgaactacgcgggt
gtaagtaaaaacctagcggtactgacagcagctaactgcaaataa
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