Pectobacterium atrosepticum JG10-08: EV46_20235
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Entry
EV46_20235 CDS
T03199
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00040
Pentose and glucuronate interconversions
patr01100
Metabolic pathways
patr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EV46_20235
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_20235
Enzymes [BR:
patr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EV46_20235
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIA72842
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Position
4483814..4484938
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKD
SSGKVVKGGAFPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGITILGTNGS
SANFGIWVVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKASTNVTVSYNFIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRL
PLQRGGQVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYKITWGKPSTPHINADDWKSTGKFPAVSYSYSPVSAQCVKDKLANYAG
VGKNQAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttgctgctcgcagcccaaccgaca
atggcggcaaacacgggaggttatgccaccactgacggcggcgacgtttccggcgctgtg
aaaaaaaccgcacgctctttgcaagagatcgtcgatatcattgaggcagcgaaaaaagat
tcaagcggtaaagtcgtcaaaggtggagccttcccgctcgtgattacctataacggtaat
gaagatgcgctgatcaaagcggctgaagccaatatctgtggccaatggagcaaagatcca
cgcggtgtagaaatcaaagagtttaccaaagggatcaccatcctcggtaccaatgggtct
tctgctaacttcggcatctgggtggttaactcttcgaatgttgtcgtgcgtaatatgcgc
ttcggctatatgccgggtggcgcaaaagatggcgatgctatccgtattgataactcacca
aacgtctggatcgaccacaacgagatcttcgctaagaacttcgaatgcgccggtacgcca
gacaacgacaccacttttgaatcggctgtcgatatcaagaaagcctcaaccaacgtcacg
gtatcgtacaactttatccatggcgtgaaaaaggtgggtttgagcggttcaagcaacacg
gatacgggtcgtaacctgacttatcatcacaatatttacagcgatgttaactcacgtctg
ccgctgcaacgtggtggtcaggtgcatgcttataacaacctgtatgacggcatcaaaagt
tcaggttttaacgtccgtcagaaagggatcgcgctgatcgaaagcaactggttcgaaaat
gcactcaacccagtaactgcacgtaatgacgactccaacttcggtacctgggaactgcgt
aacaacaacatcaccagcccgtctgattttgctaaatacaaaatcacctggggtaaacca
tccacaccgcacatcaatgcggatgactggaagagcaccggcaaattccctgcagtctcg
tatagctactccccagtttccgcacagtgcgtgaaggataaactggcgaactatgctggc
gtaggtaaaaatcaggcagtactgacagcagccaactgtaaataa
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