Phragmites australis (common reed): 133883353
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Entry
133883353 CDS
T10575
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
paua Phragmites australis (common reed)
Pathway
paua04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
133883353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133883353
Transcription factors [BR:
paua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133883353
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
133883353
NCBI-ProteinID:
XP_062178641
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Position
10:complement(14928137..14930757)
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AA seq
364 aa
AA seq
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MADALCDQLFADVDGELPHHSDADDLFGILEAWEDCVTGAGAALSPCGVDQPLAADAAVA
NGKRQRDCEDGTVQAPKRQRSAPVSSEAAETGEEGMAKMTSHITVERNRRKQMNENLAVL
RSLMPCFYVKRGDQASIIGGVVDYIKEMQQVLQSLEAKKHRKAYTDQVILSPRPPACCSP
RPPLPLKSTPPMSPRLAVPISPRTPPAPGSPYKPCRKPLPPLPLPLSPPGSAYVSPSMTP
THESAASSYLPSLDAIATELCAYAANKQQAVPAAAGGVPDVKVEFSGANLVVKTVSHRAP
GQAVKVIAALEGRSLEILHAKISTVDDTAVNSFTIKIGIECELSAEELVQEIQQNILNSS
NFHC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcactgtgcgatcagctgttcgctgacgtcgacggcgagctcccccaccac
tctgacgccgacgacctcttcggcatcctggaggcgtgggaggactgtgtgacaggcgcc
ggtgccgccttgagcccttgcggtgtcgatcagccgctggctgctgacgccgcggtggca
aatggtaagcggcagcgggactgcgaggacggtacggttcaggcacccaagaggcagagg
tccgcgccggtgtcgtcagaagctgcggagacgggcgaggagggtatggcgaagatgacg
tcgcacatcacggtggagcgcaaccggaggaagcagatgaacgagaaccttgccgtgttg
cggtccctcatgccctgtttctacgtcaagcgaggggaccaagcgtccatcataggaggg
gtggtggactacatcaaggagatgcagcaagttctgcagtcgctggaggccaagaagcat
cgcaaggcctacaccgaccaggtaatcctcagcccgcggccgccggcgtgctgcagcccg
cggccaccgctgccgctcaagtccacgccgccgatgagcccgcggctcgccgtcccgatc
agcccgaggacgccgccggcgcccggcagcccgtacaagccatgcaggaagccactgccg
cctctccctctgcccctgtcaccgcctggctcagcctacgtttccccatcgatgacgccc
acgcacgagtccgcagcctcctcgtaccttccgtcgctggacgccatcgccaccgagctc
tgcgcctacgctgccaacaagcagcaggcggtgcccgcagcggctggcggggtccccgac
gtgaaggtggagttctccggggcgaacctggtggtgaagacggtgtcgcaccgcgcgcca
gggcaggcggtgaaggtcatcgccgcactcgagggccggtcgctggagatcctccacgcc
aagatcagcaccgtcgacgacacggcggtgaactccttcaccatcaagattggaatcgag
tgcgagctcagcgctgaagagctggtgcaggagattcagcaaaatattctaaattcgtcg
aatttccactgttga
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