Phragmites australis (common reed): 133886166
Help
Entry
133886166 CDS
T10575
Name
(RefSeq) protein SCARECROW-like
KO
K27742
protein SCARECROW
Organism
paua Phragmites australis (common reed)
Brite
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
GRAS
133886166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133886166
NCBI-ProteinID:
XP_062181888
LinkDB
All DBs
Position
12:1051391..1054500
Genome browser
AA seq
644 aa
AA seq
DB search
MGSSSLLLFPSSSSDANASPSYSHSHATTSSSRSLLPPLPSQDYLLLHYLQHLDHHQEPA
AAAMVRKRPAPDMDLPPPRRHVTGDLSDVTAAAAAGAPPSSASAQLPALPTQLPAFQQHA
EMDVAAPSAQAGEVAASTTAWVDGIIRDIIGSSGAAVSITQLIHNVREIIHPCNPGLASL
LELRLRSLLTAGPAPLPPPSLLHNTAPAAPTVAALPLPPPLPDKRRHEPPCQEEPNPPPQ
SPKAPTAEETAAAAAAAKERKEEKRRKQRDEEGLHLLTLLLQCAESVNADNLDDAHQTLL
EIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPPASPAAARNHGRVTAAFQVF
NGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRLGGPPRVKL
TGLGTSMEALEATGKRLSDFADTLGLPFEFCAVAEKAGNVDPEKLGVTRREVVAVHWLHH
SLYDVTGSDSNTLRLIQRLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYG
EDSTERHVVEKQLLSMEIHNVLAVGGPARTGDVKFGCWREKLAQSGFRAASLAGSAAAQA
SLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWHPIQSSGH
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcctccctcctcctcttcccctcgtcctcctccgacgccaacgcctctccc
tcctattctcattctcatgccaccacctcctcctcccgttccttattgccaccgctcccc
tcccaagactacctcctccttcactacctccaacatctagaccaccaccaagaacccgcc
gccgccgccatggtccgcaagcgccccgcccccgacatggacctcccgccgccgcgccgc
cacgtcacgggcgacctctccgacgtcaccgccgccgctgccgctggggcgccgccgtcg
tccgccagtgcgcagctcccggcgctgcccactcagctccccgcgttccagcagcacgcg
gagatggacgtcgccgcgccctcggcgcaggcgggcgaggtggcggcgtcgacgacggcg
tgggtagacggcatcattcgggacatcatcgggagcagcggcgcagcggtctccatcacg
cagctcatccacaacgtccgcgagattatccacccctgcaatcccggcctcgcctccctc
ctcgagctccgcctccgctctctcctcaccgccggtcccgctccgctgcctccgccttct
ctcctccataacaccgcgcccgccgccccaacggtcgcggcgctccctctccctcccccg
cttccagacaagcgccgccacgagccgccgtgtcaagaggagccgaacccgccgccgcag
tcgccgaaggcccccacagcggaggagactgccgcggcagccgcggccgcgaaggagcgg
aaagaagagaagcggcggaagcagcgtgacgaggagggtctacacctgctgacgctgctg
ctgcagtgcgccgagtcggtgaacgcggacaacctcgacgacgcgcaccagacgctgctg
gagatcgcggagctcgccacgccgtttggcacctccacgcagcgcgtcgccgcctacttc
gcggaggccatgtccgcgcgcctcgtcagctcctgcctcggtctgtacgcgccgctgccg
cccgcgtcccccgccgcggcgcgcaaccacggccgcgtcaccgcggcgttccaggtgttc
aacggcatcagccccttcgtcaagttctcgcatttcacggcgaaccaggccatccaggag
gcgttcgagcgggaggagcgcgtccacatcatcgacctcgacatcatgcaggggctgcag
tggccgggcctcttccacatcctcgcctcgcgcctcggtggcccgcccagggtcaagctc
actgggctgggcacgtccatggaggcgctcgaggccactgggaaacggctctcggatttc
gccgacacgctggggctgccgttcgagttctgcgccgtggcggagaaggccgggaatgtt
gacccggagaagctgggcgtcacgcggcgcgaggtcgtcgccgtccactggctgcaccac
tcgctctacgacgtcaccggctccgattccaacacgctgcggctcatccaaaggttggcc
ccgaaggtggtgacaatggtggagcaggacctcagccactcaggctccttcctggcgcgt
ttcgtggaggccatccactactactctgcgctgttcgactcgctggatgcgagctacggc
gaggacagcacggagcggcatgttgtggagaagcagctgctgtcgatggagatccacaat
gtgctggccgtgggcgggccggcacgcaccggcgacgtcaagtttgggtgctggcgcgag
aagcttgcgcagtcggggttccgtgccgcgtcgctcgcgggcagtgcggcggcgcaggcc
tcgctgctgctcggcatgttcccctccgacgggtacacgctcgtcgaggagaacggcgct
ctgaagcttgggtggaaggatctttgcctgctcactgcatctgcctggcacccaattcaa
tcctcaggccattga
DBGET
integrated database retrieval system
