Phragmites australis (common reed): 133886755
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Entry
133886755 CDS
T10575
Name
(RefSeq) adagio-like protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133886755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133886755
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133886755
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Ortholog
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GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS_3
NANM
PAS
F-box-like
F-box
PAS_4
PAS_8
ARMH5
Motif
Other DBs
NCBI-GeneID:
133886755
NCBI-ProteinID:
XP_062182554
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Position
12:complement(25122106..25126770)
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AA seq
628 aa
AA seq
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MFDAADRGVVAVKRMRLWKEEEGEGEEVLEEEEEEEEEGMEVDGEEEEGWVWGAPAAGEQ
RAAAIVVADAAEADFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPHAQRRHPLVDPM
VVSEIRRCLDEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGSVTHVIGIQLFSEANID
LSNVSYPVYTQQSNHRPSIQDLNSASHEHAPKIQSSDYCCILQLSDEVLAHNILSRLSPR
DVASIGSVCTRMHELTKNDYLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLEAA
SWRKFTVGGRVEPSRCNFSACAVGSRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKV
SASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFILDLDAQQPTWREVASEGPPLPRS
WHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSRLGHTLSVY
GKTKLFMFGGLAKSGSLRLRSSDAYMMDVGEDSPQWRQLATTGFPNISPPPRLDHVAVSL
PCGKIIMFGGSIAGLHSPAQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTRVL
VLGGHTGEEWILNELHELCLASRPDEDE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgctgcggatcgtggagtcgtggcggtgaagcggatgaggctgtggaaggag
gaggaaggtgaaggggaggaggtgttggaggaggaggaggaggaggaggaggaagggatg
gaggtggacggggaggaggaggaaggctgggtgtggggggcgccggcggcgggggagcag
agggcggcggcgatcgtggtggcggacgcggcggaggcggacttccccgtcatctacgtc
aacgccgccttcgaggccgccacggggtaccgcgcccacgaggtgctcggacgcaactgc
cgattccttcaatttcgggatccacatgcgcaaaggagacacccccttgttgatcccatg
gttgtttcagagattaggcgatgccttgatgaagggattgaattccaaggtgagttgctg
aatttccggaaagatggtgctccgctttacaacaggctaaggctcattccaatgcacggg
gatgatggctctgtgacacatgttattggaatccagctattctccgaagctaacattgat
ctcagcaacgtatcatatccagtgtatacacaacagtctaaccacaggcccagcattcaa
gatctgaactcagcttctcatgaacatgctcctaaaatccaaagttcagactactgttgt
attctccaactatcagacgaagttcttgcacacaacatattatctcgcctgtcaccaaga
gatgttgcatccattggatcagtctgcactcgaatgcatgaactaaccaaaaacgattac
ctgaggaagatggtttgccagaatgcatggggaagagatgtcactgtgaggcttgagatg
agcaccaagatgttaggatggggtcgtcttgcaagagagctgacaacccttgaggcagcc
tcatggaggaagttcacagttggaggacgtgttgagccttcacggtgcaacttcagtgca
tgtgctgttggtagccgcctcgtcctttttggaggggagggggtaaacatgcagcctatg
gatgacacatttgtgcttaacctggaggctgctaggccagaatggcgccgtgtcaaggtt
tctgcctccccacctggtcggtgggggcacactctatcatggctgaatggctcatggctg
gtagtatttggaggctgcggacagcaaggtttgctcaacgatgtcttcatccttgacctt
gatgctcagcagcctacttggagggaggttgcaagtgagggacccccactaccacggtct
tggcacagttcatgcaccttggacggttcaaaacttgttgtctcaggagggtgcaccgag
tctggtgttcttctcagtgacaccttccttcttgacctcaccaaggaaaaacctgcatgg
agggagattcctacatcctggtcaccgccatcccgccttggccacaccttgtctgtttat
ggtaagactaaactatttatgtttggtgggctggcaaagagtggctcgctccggctgcgc
tccagtgacgcctacatgatggatgttggtgaagacagtcctcaatggaggcagttggcg
acaacggggtttccgaatattagcccacctccaaggcttgatcatgtcgccgtgagcctg
ccttgcggaaagatcatcatgtttggtggctcaattgccgggctgcattctccagcacag
ctgttcttgcttgatcccgccgaggaaaaaccgacatggaggatcctgaatgtccctggg
cagcctccgaagttcgcctggggacatagcacctgtgtggttggtggcaccagggtccta
gttctgggaggccacaccggggaggagtggatcctgaacgagctccatgagctctgtctc
gcaagcaggcccgatgaagacgaatga
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