KEGG   Phragmites australis (common reed): 133889247
Entry
133889247         CDS       T10575                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133889247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133889247
   03400 DNA repair and recombination proteins [BR:paua03400]
    133889247
Spliceosome [BR:paua03041]
 Complex B
  Other components
   Prp19 complex
    133889247
 Complex C
   Prp19-CDC5 complex
    133889247
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133889247
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 DUF7791 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 133889247
NCBI-ProteinID: XP_062185727
LinkDB
Position
13:12320394..12326477
AA seq 980 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPNDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIAFEKRPPPGFYDTVGEDKPPEHVQFPT
TIEELEGKRRVDVEAQLRKQDIARNKILQRQDAPAAIMQANKLNDPEAVTKRSKLMLPPP
QISDHELEEIAKMGSASDPALAEELEEGNTATRTLLSSYSQTPRLGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGDNPDLHPSDFSGVTPRKKEIQTPNPMATPLASPGPG
ATPRIGMTPSRDGNSFGLTPKATPFRDELRINEEVEMQDSAKLELRRQAELRKSLRSGFA
SIPQPKNEYQIVMPPITEDEKEEAEEKIEEDMSDRLARERAEEQARQEALLRKRSKVLQR
SLPRPPAASVDVLRQSLIKGGESRSGSTFVPPTSLELADDLINEELLRLLEHDNAKYPLD
EKTQKEKKKGNKRQANGAAFVPEIEDFDEGELKEASSMVEEEIQHLRVAMGHENESFEDF
VKAHDACQEDLMYFPLNNSYGLASVAGKADKITALQNEFEIVKKRMDDEAKKASRLEQKI
KLLTQGYQVRAGKLWSQVQETFKQMDTATTELECFQELQKQEQMAASYRVKNLTEEVNKQ
KALERTLQSRYGGLLSTYHRIQEQLEEHKSQLKMKEAVEAENLAQEGVAAQNRAAEEENE
MSCNAEEEKGQMASATFEEPAGSKQISEDQMDVDSSNVDGEFVGPISPAPDTQRDNCEAS
VQENSSDAQSCDNATTNGVARDGIDASKLESQDNSDGSMPMDAGNQEDGKNKLPTVCAGE
GHTAVSSDHAVTNENDMVPE
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgaggatcatgataaagggaggcgtgtggaagaacacggaggacgagatcctcaaggcg
gccgtcatgaagtacggcaagaaccagtgggcgcgcatctcgtcgctgctcgtccgcaag
tccgccaagcagtgcaaggcgcggtggtacgagtggctcgacccatccatcaagaagact
gaatggacaagggaagaggatgagaagctactccatcttgctaaactcatgcctactcaa
tggaggacaattgcacccattgtaggtcgaacaccatctcagtgccttgagcgttatgag
aaacttcttgatgctgcctgtgcgaaggatgagaattatgaacctaatgatgaccctagg
aagttgcgacctggtgaaattgatccaaaccctgagtctaaacctgctcgtcctgatcct
gttgatatggatgaagacgaaaaggagatgctctctgaggcaagagctcgattagctaac
accaggggtaaaaaggcaaaacgaaaagcaagagagaaacaacttgaagaggctaggcgg
cttgcttcactgcaaaaaaggagagagctgaaggcggctggcattgatacacggcagagg
aagagaaagagaaaggggattgattataatgctgagattgcttttgaaaagagaccacct
ccaggcttttatgatacagttggtgaggacaagccacctgagcatgtgcagtttccgact
actattgaggagcttgaagggaagagaagagtggatgtagaggcacaattgaggaagcaa
gacatagccaggaacaagattctgcagcggcaggatgcccctgctgcaataatgcaagcc
aataaactcaatgacccagaagctgtcacaaagaggtccaaactaatgcttccaccacca
caaatttctgatcatgagttggaggagatagcaaagatgggtagtgccagtgaccctgct
ctagctgaggagcttgaggaaggaaatactgccacaagaactttgttatccagctattcc
cagactccaaggcttggtatgacaccattgcgaactccacagcgaactccagctgggaaa
ggtgatgctattatgatggaggcagaaaatcttgcacgtctaagggaatcacaaacacca
cttttgggaggggataatccagatcttcatccatcggatttctctggtgttacaccacgt
aagaaggagatacagactccaaatccgatggcaacacccttggcaagccctggtcctggt
gctaccccacggattggtatgacaccctccagagatgggaattcctttggtttaactcca
aaagctacaccctttcgggatgagctccgcataaatgaagaggtggaaatgcaggacagt
gctaagcttgagcttcgtaggcaagctgaactaagaaaaagcctgcgatctggttttgct
tctattccacagcctaagaatgagtaccagatagttatgccacctatcacagaggatgag
aaggaagaagctgaagagaaaattgaagaggatatgtcagacaggctagcacgagagagg
gctgaggaacaagcaaggcaggaggcattgcttagaaagagatccaaagtgttgcagaga
agtttgcctagaccacctgctgcttcagtagatgttctccggcagtctctgattaaaggt
ggtgagagcagaagtggaagtacctttgtgcctccaacatcacttgaactggctgatgat
ctaataaatgaggagctccttaggcttcttgagcatgataatgctaaatatccccttgat
gaaaaaactcaaaaagagaaaaagaaagggaacaagcggcaggcaaatggggcagctttt
gttcctgaaattgaagattttgatgagggtgaactaaaagaggctagttctatggttgaa
gaggaaattcaacatctccgtgtggccatggggcatgaaaacgaatcttttgaggatttt
gtgaaagcacatgatgcatgccaagaggaccttatgtattttcctttgaacaatagctat
ggtcttgccagtgttgctggaaaagctgataagatcaccgctttgcaaaatgagtttgaa
attgtgaagaagagaatggatgacgaagctaagaaggcttctcggcttgagcagaaaatc
aaacttctgacacaagggtaccaggtacgggccggaaaactgtggtctcaggttcaagaa
acattcaagcagatggacactgctacgacagaacttgaatgtttccaagagctccagaaa
caggaacaaatggctgcttcctaccgtgtcaaaaatttgaccgaagaagtgaataaacag
aaagcattagaacggacactccaaagccgctatggtggtttgttgtctacttaccatagg
atccaagaacagcttgaggagcacaagagtcaacttaagatgaaggaggcagtagaagca
gaaaatcttgctcaagagggggttgcagcacaaaatcgtgctgctgaggaagaaaatgaa
atgagctgtaatgctgaagaggaaaaaggacagatggcaagtgctacttttgaagaacct
gcaggaagcaagcaaatcagtgaggatcagatggatgtggacagcagtaatgtagatggg
gaattcgtaggtcctatttccccagcaccagatactcaacgggacaattgcgaggcttct
gttcaagagaactcttctgatgctcagagttgtgataacgctactactaatggtgtagct
cgtgatgggattgatgcgtccaaattagaaagtcaggataattctgatggcagcatgcct
atggatgctggtaatcaggaggatggcaagaataaactcccaactgtttgtgccggtgaa
ggacatacagctgtatcttcggatcacgctgtcacaaatgagaatgacatggttcctgag
taa

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