Phragmites australis (common reed): 133900398
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Entry
133900398 CDS
T10575
Name
(RefSeq) adagio-like protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133900398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133900398
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133900398
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
PAS_3
PAS
F-box-like
PAS_4
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
133900398
NCBI-ProteinID:
XP_062197507
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Position
19:4651855..4655418
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AA seq
614 aa
AA seq
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MFDAGDREVVAVKRMKLWEEEEEEEEGMEVDEGEGWMWGAPAAGEQRAAAIVVADAAEAD
FPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSEIRRCLNEGIE
FQGELLNFRKDGAPLYNRLRLVPMHGDDGYVTHVIGIQLFSEANIDLSNISYPVYKQQSN
HRPSIQDLNSASHEHALKIQSSDYCSILQLSDEVLAYNILSRLSPRDVASIGSVCTRMHQ
LTMNDHLRKMVCQNAWGRDATIRLEMSTKMVGWGRLARELTTLEAASWRKFTVGGRVEPS
RCNFGACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAARPEWRRVKVSASPPGRWGHTLSW
LNGSWLVVFGGCGQQGLLNDVFILDLDAQQPTWREVASEGPPLPRSWHSSCTLDGSKLVV
SGGCTESGVLLSDTFLLDLTKEKPAWREIPTFWSPPSRLGHTLSVYGKTKLFMFGGLAKS
GSLRLRSSDAYMMDIGEDSPQWKQLATTGFPNVGPPPRLDHVAVSLPCGRIIIFGGSIAG
LHSPAQLFLLDPTEEKLTWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNE
LHELCLASRPDEDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgctggggatcgcgaggtcgtggcggtgaagcggatgaagctgtgggaggag
gaggaggaggaggaggaggggatggaggtggacgagggggaggggtggatgtggggggcg
ccggcggcgggggagcagagggcggcggcgatcgtggtggcggacgcggcggaggcggac
ttccccgtcatctacgtcaacgcagccttcgaggccgccacggggtaccgcgcccacgag
gtgctcggacgcaactgccgattcctacaatttcgggatccacgtgcgcaaaggcggcat
ccccttgtcgatccgatggttgtttcagagattcggagatgcctcaatgaggggattgaa
ttccaaggtgagctcctgaatttccggaaggatggtgctccactttacaacaggctaagg
ctcgttccaatgcacggggatgatggctatgtgacacatgtcattggaatccaactattc
tctgaagctaacattgatctcagcaacatatcatatccagtgtataaacaacagtccaac
cacagacccagcattcaagatctgaactcagcttctcatgaacatgctctgaaaatccaa
agttcagactactgtagtattctccaactgtcagacgaagttcttgcgtacaacatctta
tctcgcctgtccccacgagatgttgcatcgattggatcagtctgcacccgtatgcatcaa
ttaaccatgaatgatcacctaaggaagatggtctgccaaaatgcatggggaagagatgcc
actatcaggcttgagatgagcaccaagatggtagggtggggtcgtcttgcaagagaacta
acaacccttgaggcagcctcatggaggaagtttacagttggaggtcgcgtcgagccctcc
cggtgcaacttcggtgcctgtgctgttggtaaccgccttgtccttttcggaggtgagggg
gtcaacatgcagcctatggatgacacgtttgtgcttaacctggaggctgctaggccagaa
tggcgccgtgtcaaggtttctgcctccccacccggtcggtgggggcacactctatcatgg
ttgaatgggtcatggctggtagtatttggtggctgcgggcagcaaggtttgctcaatgat
gtcttcatccttgatcttgatgctcagcagccaacatggagggaggttgcaagcgagggg
cctccactaccacgatcttggcacagctcatgcaccttggacggttcaaagcttgttgtc
tcaggggggtgcactgagtctggtgttcttctcagtgacaccttccttcttgacctcacc
aaggaaaagcctgcatggagggagattcctacattctggtcaccaccatcccgcctcggc
cacaccttgtctgtttatggtaagactaaactatttatgtttggtggtctagcaaagagt
ggctcgctccggctgcgctccagcgatgcctacatgatggatattggtgaagacagtcct
caatggaagcagttggcgacaacggggttcccgaatgttggcccaccgccaagacttgat
catgtcgccgtgagcctgccctgcggaaggataatcatatttggtggctcgattgccggg
ctgcactcaccagcacagctgttcctgcttgaccccactgaggaaaagctgacatggagg
atcctgaatgtccccgggcagcccccgaaatttgcctggggacatagcacctgtgtggtt
ggtggcaccagggtcctagttcttggaggtcacaccggggaggagtggatcctgaacgag
ctccatgagctctgcctcgcaagcaggcccgacgaagacgattga
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