Phragmites australis (common reed): 133917065
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Entry
133917065 CDS
T10575
Name
(RefSeq) THO complex subunit 7B-like isoform X1
KO
K13176
THO complex subunit 7
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133917065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133917065
03041 Spliceosome [BR:
paua03041
]
133917065
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133917065
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133917065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
PGM_PMM_III
ArsR
SH3BP4_C
Motif
Other DBs
NCBI-GeneID:
133917065
NCBI-ProteinID:
XP_062217004
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All DBs
Position
4:49037481..49040122
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AA seq
329 aa
AA seq
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MFPGAIWPLPPLPVSPRPLPRRTARDQREPTDLNPRWRRGAALRGICGGRAEHRLAAGNQ
RPVVWQPANRRLRVQSSRAGGDRPLSQDPGPGRKVAGRGGEMSAHYAFGPQEDDAIIKHR
LLTRTTTTRGEPPLKKLQKKFMSFATEVEKDTDNLSDTERLYKAFLQEINTFELPLQKSK
AVVDANIREKESFNELQIEIERQILQAQTDIEDLKKQLEKSKIERQHKEECEAIRKMISL
QPPRSETEKLIADLEKEIGDLEAENVACIRTLELRKKQFALLLHVVEELQISIEDEQRSI
ADELRAAAEEQKMSIEEGSGGASDAMAID
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttccccggcgccatctggcctcttcctcctctccccgtctctccccgtccattgccc
aggcgcaccgcacgagaccaacgggagccgacggacctaaaccctaggtggcggcgcggc
gcggcgctgcgagggatttgcggcgggcgggcggagcatcgcctcgcggccggaaatcag
cgaccggtggtctggcagcctgcaaacaggcggctgcgggtgcagagctctagagcaggc
ggcgaccggccactcagccaggacccaggaccagggaggaaagtagctggaaggggtgga
gaaatgtctgcacattatgcatttggaccgcaggaagatgatgcgattattaaacacagg
cttctgactaggacgacaactaccaggggtgaaccgccgctaaagaagcttcagaagaag
ttcatgtcctttgccactgaggttgagaaggacacagataacctaagtgacactgagaga
ctgtacaaggccttcctacaggaaattaacacttttgagctgcctcttcagaaaagcaag
gctgttgttgatgcaaacattagggagaaggagagcttcaatgagctgcagattgagatc
gagagacaaatcttgcaagctcagactgatattgaggatcttaagaagcaacttgagaag
agcaagatcgagaggcagcacaaggaggagtgtgaagcaatccgaaagatgatttctttg
cagcctccacggtcagaaactgagaaacttattgcggatcttgagaaggagattggtgat
ttggaggccgaaaatgtagcatgcataaggactttggaactaaggaagaagcagtttgct
cttcttctgcatgtggttgaggaattgcagatctcgattgaagatgagcaaaggagtata
gcagatgagctgagagccgccgccgaagagcagaagatgagcatagaagaaggcagcggt
ggtgcctcagatgccatggctatagactga
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integrated database retrieval system
