Phragmites australis (common reed): 133917990
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Entry
133917990 CDS
T10575
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133917990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133917990
03036 Chromosome and associated proteins [BR:
paua03036
]
133917990
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
133917990
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133917990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
Dcr1-like_dsRNA-bd_dom
SNRNP27
MT-A70
DUF4562
DUF5532
Motif
Other DBs
NCBI-GeneID:
133917990
NCBI-ProteinID:
XP_062217770
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All DBs
Position
1:complement(38161383..38164401)
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AA seq
262 aa
AA seq
DB search
MAPPCGDAASAAAAADLTSVLSREGARLPPLPGRVGGNAAERGEDGDKNKKAKKENTQRI
TGWGLREYSKIVSKKVETKGRTTYNEASIQVADEIFAELTMALNGQEFDERNIRRRVYDS
FNVLIALRIIAKDKKEIKWMGLSNFRSEKIKKLEEARKELMTKIKNKKKLLQEIEKQFDD
LHYIKLRNQVLQRPAESANGIHLPFLLVKASRKARVEIEISEDSKFACFDFSCTPFTLHD
DVSILDGIRRNSIRRAGFATLH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccctgcggtgatgctgcttccgccgccgccgccgccgatctgactagcgtg
ctcagtcgcgagggcgccaggctccctccgcttcccggacgcgtcggcggcaatgcggcc
gagaggggggaggatggtgacaagaacaagaaggcgaagaaggaaaatacgcagcggatc
accgggtgggggctccgcgagtacagcaagatagtttctaagaaagttgagaccaaagga
cgaacaacttataatgaggcatctatccaggttgcagatgaaatttttgcggagctaacc
atggcgcttaatggtcaagagtttgatgagaggaatattaggcggagagtgtacgattct
ttcaatgtgctaatcgcactacgtattatcgcaaaagacaaaaaggagataaagtggatg
ggcctgtctaatttcagatctgaaaagataaagaagttggaggaagctcgtaaagaactt
atgaccaagattaagaacaagaagaaacttcttcaggaaattgaaaaacagtttgatgac
ctccattatatcaagttacgcaaccaggtactacagaggccagcagagagtgccaatggt
atccaccttccattcttattggtcaaggcgtccagaaaagcaagggtggaaattgagatt
tcagaagactcaaagtttgcgtgtttcgacttcagttgtacaccattcaccttgcatgat
gatgtctcaatccttgatgggatcaggcgtaacagcataaggagagctggctttgctact
cttcattag
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