Phragmites australis (common reed): 133921477
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Entry
133921477 CDS
T10575
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133921477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133921477
Ubiquitin system [BR:
paua04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
133921477
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
133921477
NCBI-ProteinID:
XP_062222347
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Position
6:8016635..8019321
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AA seq
459 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGGVN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaagaccctgactggcaagaccatcactcttgaggtcgagagctct
gatacaattgacaatgttaaggctaagattcaggataaggaaggcatccctccggaccag
cagaggctcatctttgctggcaagcagctagaggatggccgtacattagccgattacaac
atccagaaggagtctaccctccaccttgtcctgcgtctgaggggtggcatgcagatcttt
gtgaagacccttacaggcaagacaatcacgcttgaggttgagagctctgacaccatcgac
aatgtcaaggccaagattcaggacaaggagggcattcccccggaccagcagaggctcatc
tttgctggcaagcagcttgaggatggccgtacactggctgattacaacattcagaaggaa
tctactctccaccttgtcctgcgtctgaggggtggtatgcagatctttgttaagaccctt
acaggcaagacaatcacgcttgaggttgagagctccgacaccattgacaatgtcaaggcc
aagattcaagacaaggagggcattcccccggaccagcagaggctcatcttcgctggaaag
cagcttgaggatggccgtaccttggccgactacaatatccagaaggagtctaccctgcat
ctggttttacgcctccgaggagggatgcaaatctttgtgaagacacttactgggaagacc
atcacacttgaagtggagagctccgacaccatcgacaatgtcaaggccaagatccaagac
aaggagggcattccacctgaccagcagcgactcatctttgctggaaagcagctggaggac
gggcgcacattagctgattacaatatccagaaagagtctactcttcacttggtcctccgc
ctaaggggagggatgcagatttttgtcaagactctaactggaaagaccatcacacttgaa
gttgagagctctgacaccatagataatgtcaaggccaagatccaggacaaggagggcatt
cccccagaccagcagaggctcatctttgctggaaagcagcttgaggatggccgtaccttg
gctgactataatatccagaaggagtctaccctgcatctggttttgcgcctccgaggaggg
atgcagatctttgtgaagacgctaactggcaagacaatcacacttgaggtggagagctct
gacaccattgataatgtgaaggccaagatccaggacaaggagggaattcctcccgatcag
cagaggctcatctttgctgggaagcagctggaggatgggcgtaccttggcagattacaac
atccagaaggaatctacacttcatctcgtcctgcgcctccgcggtggtggtgttaactga
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