Phragmites australis (common reed): 133924382
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Entry
133924382 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133924382
KO
K14827
pre-rRNA-processing protein IPI1
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133924382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133924382
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
133924382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_GCN1
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
133924382
NCBI-ProteinID:
XP_062225865
LinkDB
All DBs
Position
7:complement(25706556..25722099)
Genome browser
AA seq
974 aa
AA seq
DB search
MLSHVHSKWCGFVSRRLPRGLSTRGKGRDPVADRASKPVLTLVAPPVARATQNPSDRRRR
RRHPPRQPLPPSKRPVAKPCSHASAMGRPKGGVASSSSSKKPKPKPKQRGGVDFKKYKHK
VGRKLPPPKNATNTEIKSKAIVLPEQSMASERAGMAVNKRGLTLRELLQQTAHYNANVRR
AALNGIKDIVVKHPTELKLHKVAIIEKLQERICDTDKVVHESLYNILQSLIFPSLKEDNA
ISTRSTLFLLMANILNGMTHLSMGIQLMAFRFLELVVLNFPSSFPNYAEQAFNNFVAVLS
NDRINIHDRNKLNSVLSGLGHCLSLVAKATENDDTSNRQVHNLSARELWKSNTDEDNSRG
RAFATSSLLGKLQNLVQILVNSIEVSASELCAKSAIDAQSSEALLSALHCLDLICRIFIH
VVKKSQSNFSISKTQFGPDWLRSSLLVHLKNLWGVKRLFHEKGDDKFFIFNLKIAEIFLC
LSAWIDSTMFPAEEFCQFVSSLLAKAKTIRNKDLMEMYLSPLITCIPGLISNAPDDSKGY
LLEAFTDAFRDCKVDWKLILPYLDAVGEMLLPEKTGIWFSENDSAMLGYRSAWIHELPGI
LLQAIDKAPSVTKVVLELLLRIGQYFPTMDCGNLRSFIKLFGAKSSSGTMELGPFVNLPR
DCQELAISCLYYFPSLLPDIIGPLASCCLSDVLEPFILFRVVEVLQSIYKAGNLQITEQL
SFLLLLMARFEVHPEDSSKVSNWDTFKSLNHLLLNSLSEMGDGSLVLELMWNNLSNAIAQ
KPSMHNINGLFRIIVTLDAGTTKLMNEDVIKLIAGYLVDASLDLSKTIEFGFQPDKTRLF
QYFIKPCIIMFDKNDKVLCSTLEMLKSFVTGDYNLFSSLSNLNYPRELSCRVGVVTTILI
FLCNDRKLHRNLSSSKSVIKGILEYIRHQLDSRVPDVTYQEKQKLKSAFEQLKTKALRLN
CWTRSELEGLSSTT
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcatgtgcattccaaatggtgtggctttgttagtaggaggttaccccgtggg
ctttccacccggggaaaaggccgggatcccgtcgcggatcgggcctccaaaccagtcctt
accctcgttgcgccgcccgtggcgcgcgccacgcaaaacccctccgaccgccgccgccgc
cgccgccatccaccacgccaacccctcccgccctccaagcgcccggtcgcgaaaccctgc
tcccacgccagcgccatggggcgaccgaagggcggcgtggcctcctcctcctcctcgaag
aagccgaagccgaagccgaagcagcgcggcggcgtcgacttcaagaagtacaagcacaag
gtcgggcgcaagctgccgccgccgaagaatgctaccaacacggagatcaagtccaaagcg
atcgtgctgccggagcagagcatggcctcggagagggcggggatggcagtgaacaagcgc
gggctcacgctgcgggagctcctgcagcagacggcgcactacaacgccaatgtgcggcga
gctgcattgaatggaataaaggacattgttgtcaagcatccaacagagcttaaactgcac
aaggtggctataattgagaagctgcaggaaaggatatgcgacactgacaaggtggtccat
gaatcgttatacaatatactgcagtctctgatcttcccatctttgaaagaggataatgct
atatctacgcggagtacactgtttctactgatggccaatattctgaatggaatgacccat
ctatctatgggcatccagttaatggctttcaggtttttggagcttgtggttcttaatttc
ccatcatcctttcctaactatgctgaacaggccttcaataattttgttgctgtactgagc
aacgacagaatcaacatacatgataggaataaacttaacagtgtccttagtgggcttggg
cactgcctttccttggttgctaaagcaacagaaaatgatgatacatcaaatcgacaggtt
cataacctctctgcgagggaactttggaaatctaacactgatgaagataactcaagaggc
agagcatttgcgacgtccagtttattagggaagcttcagaaccttgtccaaatccttgtt
aattctatagaggtttcagcttcagagctctgtgcaaagtcagctattgatgctcaatca
agtgaagcattgttatcagcccttcattgtctggatctaatatgtaggatatttattcat
gtggtgaagaaatctcagtcgaatttttcgatatccaaaactcagttcgggcctgactgg
ttgagaagttccttgttggtacatctaaagaatttatggggtgtgaagcgtttgtttcat
gaaaagggagatgacaaatttttcattttcaacctgaagattgctgaaatctttttgtgc
ttgagtgcatggatagatagcacaatgtttccagctgaagaattttgtcagtttgtatcg
tcgctactcgcaaaggcaaaaacaattcgcaataaggatctcatggaaatgtatttgagc
ccacttataacttgcataccaggtcttatatccaatgccccagatgactcaaaaggatat
ttgttggaggcatttacagatgcatttagagattgcaaggtggattggaaactaatcttg
ccatatttggatgcagtgggagaaatgctgcttcctgagaaaacaggcatatggttttct
gaaaatgattcggccatgttgggctatcgtagcgcttggatacatgagctacctggaatt
ttactacaagcaattgataaagccccctcggttacaaaggttgttttggagcttcttcta
agaattggacagtacttccccacaatggactgtggaaacctgcgctccttcataaagtta
tttggtgccaaatcatcatctggaacgatggagcttggtccttttgttaaccttcctcgc
gattgccaagaacttgccatttcatgcctttattacttccccagtctgctccctgacata
atcgggccactggcctcatgttgcttaagtgatgtgctggaacccttcatattgttcagg
gttgttgaggtcctacagtcaatatacaaggctgggaatttacagataacagagcaactc
agtttcttgttgctgctaatggcaagattcgaagttcatcctgaggattccagtaaggtc
tcaaattgggatactttcaagtcgctgaatcacctacttttaaattccctgtctgaaatg
ggtgatggctcactggttcttgaattgatgtggaataatttatctaacgcaattgcacaa
aaaccatcaatgcataatataaatggcttgtttagaattattgtcacacttgatgcagga
actactaaactcatgaatgaagatgttataaagcttatagctggatacttggtcgatgct
tctttggatttgtctaaaaccattgaatttggttttcaacctgataagacaagattattt
cagtactttatcaagccttgcatcatcatgtttgacaagaatgacaaggttctttgcagc
acattggagatgcttaagtcttttgtaacaggagattataatctgttttcatctctctcc
aatttaaattacccaagggagctctcatgtcgagttggtgttgtcacaaccatactgatc
ttcttatgcaatgaccggaaactccatagaaatctttcttctagcaaatcggttattaaa
ggcatcctggaatatataaggcatcagttggattctagagtacctgatgtaacatatcaa
gaaaaacagaagttaaaatctgcttttgagcaactcaagaccaaagcattgcggttgaat
tgctggactagaagtgaactggaggggctttcaagcaccacataa
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