Pseudonocardia autotrophica: Pdca_66230
Help
Entry
Pdca_66230 CDS
T06156
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paut03110
]
Pdca_66230 (clpB)
Chaperones and folding catalysts [BR:
paut03110
]
Heat shock proteins
HSP100
Pdca_66230 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
ATPase_2
Mg_chelatase
IstB_IS21
AAA_14
AAA_7
AAA_23
bpMoxR
AAA_18
TniB
NBD_SMAX1
T2SSE
NACHT
Zeta_toxin
AAA_24
AAA_19
DNA_pol3_delta2
ABC_tran_CTD
SpGH101_helical
Mis12
HOOK
Seadorna_VP6
CDK5RAP3
Fez1
Motif
Other DBs
NCBI-ProteinID:
BBG05414
LinkDB
All DBs
Position
complement(7016281..7018911)
Genome browser
AA seq
876 aa
AA seq
DB search
MDSFNPTTRTQQAISAAVQAATLAGNPDVGPTHLLGALLAQGDGIAAPLLTAVGADAAAV
RAELTALGNRLPSASGSSVSAPQLQRDALAAITAAQQLATEMGDEYVSTEHLLVGLARSG
GPVAQLLQRHGATPDALRDAFAQVRGSARVSSPDPESSYQALEKYGQDLTASARDGDLDP
VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIAGDVPESLRNKRVIT
LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEIITFIDELHTIVGAGASGEGAMDAGNM
IKPMLARGELRMVGATTLDEYRKHIEKDPALERRFQQVLVGEPSVEDSVGILRGLKERYE
VHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDTVERA
VRRLEIEEMALTQESDAASKDRLVALRAELAEKREELSALTARWQNEKGAIESTRELKEQ
LEQLRGESDRAERDGDLGRAAELRYGRIPALEKELAEQTAAIDTHEDVMLKEEVGPDDVA
DVVSSWTGIPAGRMLEGETAKLLRMEDELGRRVIGQAEAVRVVSDAVRRARAGISDENRP
TGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGYD
QGGQLTEAVRRRPYTVVLLDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILVLT
SNLGSQAIADQALDEKARENAVMAVVRTHFKPEFLNRLDDVVVFHALSTDELTHIVDIQI
GVLGRRLAKRRLTLDVTDPAREWLALNGFDPVYGARPLRRLVQSSIGDQLARALLGGSIR
EGDTVRVDLDPAASGGTGGLIVGRALTGADPVAIAN
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggactccttcaaccccaccacccgtacccagcaggccatctccgccgccgtgcaggcc
gcgacgctggccggaaaccccgatgtcggcccgacccacctgctcggcgcgctgctggcc
cagggcgacggcatcgccgccccgctgctgacggcggtcggcgcggacgccgccgccgtc
cgcgccgagctgaccgcgctcgggaaccggctgccctcggcgtccggttcctcggtgagc
gcgccgcagctgcagcgggacgcgctggccgcgatcaccgctgcccagcagctggccacc
gagatgggcgacgagtacgtctccaccgagcacctgctcgtcgggctcgcccggtccggc
ggcccggtcgcccagctgctgcagcgccacggcgcgaccccggacgcgctgcgcgacgcg
ttcgcccaggtccgcggctcggcccgggtgagcagcccggacccggagagcagctaccag
gcgctggagaagtacggccaggatctgacggccagcgcgcgtgacggcgacctcgacccg
gtcatcggccgggacaccgagatccggcgcgtcgtgcaggtgctgtcccggcgtaccaag
aacaacccggtgctgatcggtgagccgggcgtcggcaagaccgcgatcgtggagggcctg
gcccagcggatcatcgccggggacgtgcccgagtcgctgcggaacaagcgggtcatcacg
ctcgatctcgggtcgatggtggccggcgcgaagtaccgcggtgagttcgaggagcggctc
aaggctgtactcaaggagatcaccgactcggccggcgagatcatcaccttcatcgacgag
ctgcacaccatcgtcggtgccggtgcgtccggtgagggcgcgatggacgccgggaacatg
atcaagccgatgctcgcccgcggggagctgcggatggtcggtgccaccacgctcgacgag
taccgcaagcacatcgagaaggacccggcgctggagcgccggttccagcaggtgctggtc
ggcgagccgagcgtggaggacagcgtgggcatcctgcgcggtctgaaggagcgctacgag
gtgcaccacggcgtccggatcaccgacgccgcgctggtcgccgccgccaccctctccgat
cgttacatcaccgcccggttccttccggacaaggcgatcgacctggtcgacgaggccgcg
tcccggctccggatggagatcgactcgcgcccggtggagatcgacaccgtggagcgggcc
gtgcgccggctggagatcgaggagatggcgctgacccaggagtccgacgccgcctcgaag
gatcgcctggtggcgctgcgggccgagctggccgagaagcgcgaggagctctccgcgctc
accgcccgctggcagaacgagaagggcgccatcgagtccacccgggagctcaaggagcag
ctggagcagctgcgcggcgagtccgaccgggccgagcgcgacggcgacctgggccgggct
gcggagctgcgctacgggcgcatcccggcactggagaaggagctggccgagcagaccgcg
gccatcgacacccacgaggacgtgatgctcaaggaggaggtcggcccggacgacgtcgcc
gacgtcgtcagctcctggaccggcatcccggccggccggatgctggagggcgagaccgcc
aagctgctccgcatggaggacgagctgggccggcgggtgatcgggcaggccgaggccgtc
cgggtcgtctccgacgccgtccgccgggcccgtgccggcatctccgacgagaaccggccg
accgggtcgttcctgttcctcgggccgaccggcgtcggcaagaccgagctggccaaggcg
ctcgccgagttcctgttcgacgacgagcgggcgatggtccgcatcgacatgagcgagtac
agcgagaagcacagcgtcgcccgtctcgtgggtgccccgcccggatacgtcggctacgac
cagggcggccagctcaccgaggcggtccggcgacgcccgtacacggtggtgctgctcgac
gaggtggagaaggcccacccggacgtcttcgacacgctcctgcaggtgctcgacgacggc
cggctgaccgacggccagggccgcaccgtggacttccgcaacaccatcctggtgctgacg
tccaacctcggcagccaggcgatcgccgaccaggcgctcgacgagaaggcgcgcgagaac
gccgtcatggcggtcgtccggacgcacttcaagcccgagttcctgaaccggctcgacgac
gtcgtggtcttccacgcgctctcgaccgacgagctgacccacatcgtcgacatccagatc
ggcgtgctgggccgcaggctcgccaagcgcaggctgaccctggacgtcaccgacccggcc
cgcgaatggctggcgctcaacgggttcgacccggtctacggggcacgtccgctgcgcagg
ctggtgcagtcctcgatcggggaccagctcgcccgcgcgctgctcggcgggtcgatccgg
gagggcgacacggtgcgggtcgacctggacccggcggcgtccgggggcaccggcgggctg
atcgtcggccgggcgctcaccggggcggatccggtcgcgatcgcgaactga
DBGET
integrated database retrieval system
