Polyangium aurulentum: E8A73_019465
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Entry
E8A73_019465 CDS
T08107
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pauu
Polyangium aurulentum
Pathway
pauu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E8A73_019465 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pauu03021
]
E8A73_019465 (rpoB)
03400 DNA repair and recombination proteins [BR:
pauu03400
]
E8A73_019465 (rpoB)
Enzymes [BR:
pauu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E8A73_019465 (rpoB)
Transcription machinery [BR:
pauu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E8A73_019465 (rpoB)
DNA repair and recombination proteins [BR:
pauu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E8A73_019465 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
UQA62507
LinkDB
All DBs
Position
4833741..4837868
Genome browser
AA seq
1375 aa
AA seq
DB search
MPSVVQSNFRIRKNLGRVGRIIDVPNLIDIQKSSYEKFLQMNVPPNERDEVGLQAVFRSV
FPIKDFNGTSELVFVSYNLEAPKYDVEECRQRGMTYAAPIKVTNQLMIYDTRDGGERIVR
DIKEQEVYFGELPLMTETGTFIINGTERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIYVRIDRRRKMHATVLLRALGYSTQDLLNYFYSTESVYIEKG
GKYSKSIEYDLLAGQRATRDIKIKEDVIVKKNQKFTRAAIRKMKEAKLERLAIELEELAG
KVAAHDVVDPETGEVIVEVNEELTEQKLERIRDAKIEHFRVLFIDGLNVGSYLRDTLLAD
KVKTQEDSILEIYRRLRPGDPPTLETAKTLFHNLFFNPERYDLSKVGRLKLNYKFYRDLP
EGQRPNLDLTVLTPQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHATHYGRICPIETPEGPNIGLIASLSTFARVNEFGFV
ETPYRKVAEATVTDEVVWLSALEEEGKYIAQATAGLGEDNRFRENVVSARFNGEFKIVSP
EMIELMDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLLRSTAPLVGTGMEGR
LARDSGVCVVARRPGVVESVDATRIVVRAEGEGAEVPDIYHLMKYQRSNQSTCYTQKPIV
STGDAVKVGDVLADGPSTDMGELALGQNVLVAFMPWQGYNFEDSILVSERIAKDDVFTSI
HIEEFECVARDTKLGKEEITRDIPNVGEEALKDLDDSGIVRIGAEVRPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLKVPPGVSGIVINARVFSRKGTEKDERARDIEDQ
ERARIERTRDEEIKILRDSFYRRVREILVGKTTNGKLVDDKGKVLLQKGDEIAEAALLEI
PRRYWGEIPVEETDRIQQILRDLEDLVRTREEHFRDKIERLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVISRILPEEDMPYLRDGSPVDIVLNPLGVPSRMNVGQILEV
HLGWGALELGKQLQRMVEEQRAAHEIKERITAIYGGDEEASALVRLMDDGDVSRAAKKVK
NGVFVASPVFDGASEEDIKGALALAGLPSTGQAILFDGRTGEAFDQNVTVGIMYMLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYALQEFLTVKSDD
VMGRTRMYEAIVKGEYTLEAGLPESFNVLIKELQSLCLNVELVETGLEASAAEEE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggttgtccaatccaacttccgcatccgtaagaacctggggcgcgtgggtcgt
atcatcgacgtccccaacctgatcgacatccagaagtccagctacgagaagttcctccag
atgaacgttccgccgaacgagcgggacgaggtcgggctccaggcggtgttccgctcggtg
ttcccgatcaaggacttcaacggcacgagcgagctcgtcttcgtctcttacaacctggag
gcgccgaagtacgacgtcgaggagtgccgccagcgcggcatgacctacgcggcgccgatc
aaggtcaccaaccagctcatgatctacgacacccgtgacggcggcgagcgcatcgtccgg
gatatcaaggagcaggaggtgtacttcggcgagctgccgctgatgaccgagaccggtacg
ttcatcatcaacggtaccgagcgcgtcgtcgtcagccagcttcaccgttcgcccggcgtg
ttcttcgatcacgacaagggcaagacgcactcgagcggcaagcttctctactcggcgcgt
gtgatcccctatcgcggctcgtggctcgatttcgagttcgacccgaaggacatcatctac
gtgcgcatcgaccggcgccggaagatgcacgcgaccgtgctcctgcgcgccctcggctac
tcgacgcaggacctgctcaactacttctactcgaccgagagcgtctacatcgagaagggc
ggcaagtactcgaagagcatcgagtacgaccttctcgcgggtcagcgcgcgacgcgcgac
atcaagatcaaagaagacgtcatcgtcaagaagaaccagaagttcacgcgcgcggccatc
cgcaagatgaaggaggccaagctcgagcgcctcgcgatcgagctcgaggagctggctggc
aaggtcgccgcgcacgacgtcgtggatccggagaccggcgaggtcatcgtcgaggtcaac
gaggagctcaccgagcagaagctcgagcgcatccgcgacgcgaagatcgagcacttccgc
gtgctgttcatcgacggcctgaacgtcggctcgtacctgcgcgacacgctgctcgccgac
aaggtgaagacgcaggaggactcgatcctcgagatctaccggcgcctgcgcccgggcgat
ccgccgacgctcgagaccgccaagacgctcttccacaacctgttcttcaacccggagcgc
tacgacctgtcgaaggtcggccgcctcaagctgaactacaagttctaccgggatctgccc
gagggccagcggccgaacctcgacctcacggtcctcacaccgcaggacatcctcgagacc
gtccggcacctcatcgagctgaagaacggtcgcggctcggtcgacgacatcgaccacctc
ggcaaccgccgcgtccgcgccgtcggtgagctgatggagaaccagtaccggatcggcctg
gtccggatggagcgcgccatcaaggagcgcatgagcatgtcgcaggagatcgacacgctc
atgccgcacgatctcatcaacgcgaagcccgtcagcgcggtggtcaaggagtacttcggc
agctcgcagctgtcgcagttcatggaccagaccaacccgctctcggaggtcacgcacaag
cggcgcctgtccgcgctcggccccggcggcctcacgcgcgagcgtgccggcttcgaggtc
cgcgacgtccacgcgacccactacggccgcatctgcccgatcgagacgccggaaggcccg
aacatcggcctcatcgcgtcgctgtcgaccttcgcccgcgtgaacgagttcggcttcgtc
gagacgccgtaccgcaaggtcgccgaagccacggtgaccgacgaggtcgtgtggctcagc
gcgctcgaggaagagggcaagtacatcgcgcaggcgacggccgggctcggcgaggacaac
cgcttccgcgagaacgtcgtctcggcccgcttcaacggcgagttcaagatcgtctcgccc
gagatgatcgagctgatggacgtcgcgcccaaccagatggtgagcgtcgcggcggcgctc
gtgccgttcctcgagcacgacgacgccaaccgcgcgctcatgggcgcgaacatgcagcgt
caggccgtgccgctgctccgttcgaccgcgccgctcgtcggcacgggcatggaggggcgt
ctcgcccgcgactctggcgtgtgcgtggttgcgcgccgcccgggcgtggtcgagagcgtc
gacgcgacgcgcatcgtggtgcgcgccgagggcgagggcgccgaggtgccggacatctac
cacctcatgaagtaccagcgctcgaaccagtcgacctgctacacgcagaagccgatcgtc
agcacgggtgacgcggtgaaggtgggcgacgtcctcgcggacggcccgtcgaccgacatg
ggcgagctcgccctcggccagaacgtgctcgtcgcgttcatgccgtggcagggctacaac
ttcgaggactcgatcctcgtgtccgagcgcatcgccaaggacgacgtcttcacctcgatt
cacatcgaggagttcgagtgcgtcgcccgcgacaccaagctcggcaaggaggagatcacg
cgcgacatcccgaacgtcggcgaggaggccctgaaggacctcgacgactcgggcatcgtg
cggatcggcgccgaggttcgtcctggcgacatcctcgttggaaagatcacgcccaagggc
gagacccagctctcgccggaggagaagctgctgcgcgcgatcttcggcgagaaggccggc
gacgtgcgcgacagctcgctcaaggttccgccgggcgtgagcggcatcgtgatcaatgcg
cgggtcttctcgcgcaagggcacggagaaggacgagcgcgcgcgcgacatcgaggatcag
gagcgcgcccgcatcgagcgcacgcgcgacgaggagatcaagatcctgcgcgactcgttc
taccgccgggtccgcgagatcctcgtcggcaagacgacgaatggcaagctcgtcgacgac
aagggcaaggtcctcttgcagaagggcgacgagatcgccgaggcggccctgctcgagatc
ccgcgccgttactggggcgagatcccggtcgaggagaccgaccggatccagcagatcctg
cgcgatctggaggacctcgtgcgcacgcgcgaggagcacttccgcgacaagatcgagcgc
ctgtcgaagggcgacgagctgccgccgggcgtgatcaagatggtgaaggtctacatcgcc
atcaagcgcaagctccaggtcggcgacaagatggccggtcgccacggcaacaagggcgtc
atcagccggatcctccccgaggaggacatgccgtacctgcgtgacggcagcccggtcgac
atcgtgctgaacccgctcggcgtgccgagccgcatgaacgtcggccagatcctcgaggtc
cacctcggctggggcgcgctcgagctgggcaagcagctgcagcgcatggtcgaggagcag
cgcgccgcgcacgagatcaaggagcgcatcacggcgatctacggcggcgacgaggaggct
tcggcgctcgtcaggctgatggacgacggggatgtgtcgcgtgcggcgaagaaggtgaag
aacggcgtgttcgtcgcttcgccggtcttcgacggcgcgagcgaggaggacatcaagggc
gcgctcgcgctcgcgggcctgccctcgacgggccaggcgatcctcttcgacggtcgcacg
ggcgaggcgttcgatcagaacgtcacggtgggcatcatgtacatgctgaagctccaccac
ctggtcgatgacaagatccacgctcgttcgatcggcccctactcgctcgtcacgcagcag
ccgctcggcggtaaggcccagttcggcggccagcgcctcggcgagatggaggtttgggcg
atggaggcctacggcgcggcgtacgcgctgcaggagttcctcacggtcaaatccgacgac
gtgatgggtcgtacgcgcatgtacgaggccatcgtgaagggggagtacacgctggaggcc
ggcctgccggagagcttcaacgtgctcatcaaggagctgcagtcgttgtgtctgaacgtc
gagctcgtcgagacgggcctcgaggcttcggccgcggaagaggagtga
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