KEGG   Polyangium aurulentum: E8A73_019465
Entry
E8A73_019465      CDS       T08107                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pauu  Polyangium aurulentum
Pathway
pauu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pauu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E8A73_019465 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pauu03021]
    E8A73_019465 (rpoB)
   03400 DNA repair and recombination proteins [BR:pauu03400]
    E8A73_019465 (rpoB)
Enzymes [BR:pauu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E8A73_019465 (rpoB)
Transcription machinery [BR:pauu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E8A73_019465 (rpoB)
DNA repair and recombination proteins [BR:pauu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E8A73_019465 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45
Other DBs
NCBI-ProteinID: UQA62507
LinkDB
Position
4833741..4837868
AA seq 1375 aa
MPSVVQSNFRIRKNLGRVGRIIDVPNLIDIQKSSYEKFLQMNVPPNERDEVGLQAVFRSV
FPIKDFNGTSELVFVSYNLEAPKYDVEECRQRGMTYAAPIKVTNQLMIYDTRDGGERIVR
DIKEQEVYFGELPLMTETGTFIINGTERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIYVRIDRRRKMHATVLLRALGYSTQDLLNYFYSTESVYIEKG
GKYSKSIEYDLLAGQRATRDIKIKEDVIVKKNQKFTRAAIRKMKEAKLERLAIELEELAG
KVAAHDVVDPETGEVIVEVNEELTEQKLERIRDAKIEHFRVLFIDGLNVGSYLRDTLLAD
KVKTQEDSILEIYRRLRPGDPPTLETAKTLFHNLFFNPERYDLSKVGRLKLNYKFYRDLP
EGQRPNLDLTVLTPQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHATHYGRICPIETPEGPNIGLIASLSTFARVNEFGFV
ETPYRKVAEATVTDEVVWLSALEEEGKYIAQATAGLGEDNRFRENVVSARFNGEFKIVSP
EMIELMDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLLRSTAPLVGTGMEGR
LARDSGVCVVARRPGVVESVDATRIVVRAEGEGAEVPDIYHLMKYQRSNQSTCYTQKPIV
STGDAVKVGDVLADGPSTDMGELALGQNVLVAFMPWQGYNFEDSILVSERIAKDDVFTSI
HIEEFECVARDTKLGKEEITRDIPNVGEEALKDLDDSGIVRIGAEVRPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLKVPPGVSGIVINARVFSRKGTEKDERARDIEDQ
ERARIERTRDEEIKILRDSFYRRVREILVGKTTNGKLVDDKGKVLLQKGDEIAEAALLEI
PRRYWGEIPVEETDRIQQILRDLEDLVRTREEHFRDKIERLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVISRILPEEDMPYLRDGSPVDIVLNPLGVPSRMNVGQILEV
HLGWGALELGKQLQRMVEEQRAAHEIKERITAIYGGDEEASALVRLMDDGDVSRAAKKVK
NGVFVASPVFDGASEEDIKGALALAGLPSTGQAILFDGRTGEAFDQNVTVGIMYMLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYALQEFLTVKSDD
VMGRTRMYEAIVKGEYTLEAGLPESFNVLIKELQSLCLNVELVETGLEASAAEEE
NT seq 4128 nt   +upstreamnt  +downstreamnt
atgccgtcggttgtccaatccaacttccgcatccgtaagaacctggggcgcgtgggtcgt
atcatcgacgtccccaacctgatcgacatccagaagtccagctacgagaagttcctccag
atgaacgttccgccgaacgagcgggacgaggtcgggctccaggcggtgttccgctcggtg
ttcccgatcaaggacttcaacggcacgagcgagctcgtcttcgtctcttacaacctggag
gcgccgaagtacgacgtcgaggagtgccgccagcgcggcatgacctacgcggcgccgatc
aaggtcaccaaccagctcatgatctacgacacccgtgacggcggcgagcgcatcgtccgg
gatatcaaggagcaggaggtgtacttcggcgagctgccgctgatgaccgagaccggtacg
ttcatcatcaacggtaccgagcgcgtcgtcgtcagccagcttcaccgttcgcccggcgtg
ttcttcgatcacgacaagggcaagacgcactcgagcggcaagcttctctactcggcgcgt
gtgatcccctatcgcggctcgtggctcgatttcgagttcgacccgaaggacatcatctac
gtgcgcatcgaccggcgccggaagatgcacgcgaccgtgctcctgcgcgccctcggctac
tcgacgcaggacctgctcaactacttctactcgaccgagagcgtctacatcgagaagggc
ggcaagtactcgaagagcatcgagtacgaccttctcgcgggtcagcgcgcgacgcgcgac
atcaagatcaaagaagacgtcatcgtcaagaagaaccagaagttcacgcgcgcggccatc
cgcaagatgaaggaggccaagctcgagcgcctcgcgatcgagctcgaggagctggctggc
aaggtcgccgcgcacgacgtcgtggatccggagaccggcgaggtcatcgtcgaggtcaac
gaggagctcaccgagcagaagctcgagcgcatccgcgacgcgaagatcgagcacttccgc
gtgctgttcatcgacggcctgaacgtcggctcgtacctgcgcgacacgctgctcgccgac
aaggtgaagacgcaggaggactcgatcctcgagatctaccggcgcctgcgcccgggcgat
ccgccgacgctcgagaccgccaagacgctcttccacaacctgttcttcaacccggagcgc
tacgacctgtcgaaggtcggccgcctcaagctgaactacaagttctaccgggatctgccc
gagggccagcggccgaacctcgacctcacggtcctcacaccgcaggacatcctcgagacc
gtccggcacctcatcgagctgaagaacggtcgcggctcggtcgacgacatcgaccacctc
ggcaaccgccgcgtccgcgccgtcggtgagctgatggagaaccagtaccggatcggcctg
gtccggatggagcgcgccatcaaggagcgcatgagcatgtcgcaggagatcgacacgctc
atgccgcacgatctcatcaacgcgaagcccgtcagcgcggtggtcaaggagtacttcggc
agctcgcagctgtcgcagttcatggaccagaccaacccgctctcggaggtcacgcacaag
cggcgcctgtccgcgctcggccccggcggcctcacgcgcgagcgtgccggcttcgaggtc
cgcgacgtccacgcgacccactacggccgcatctgcccgatcgagacgccggaaggcccg
aacatcggcctcatcgcgtcgctgtcgaccttcgcccgcgtgaacgagttcggcttcgtc
gagacgccgtaccgcaaggtcgccgaagccacggtgaccgacgaggtcgtgtggctcagc
gcgctcgaggaagagggcaagtacatcgcgcaggcgacggccgggctcggcgaggacaac
cgcttccgcgagaacgtcgtctcggcccgcttcaacggcgagttcaagatcgtctcgccc
gagatgatcgagctgatggacgtcgcgcccaaccagatggtgagcgtcgcggcggcgctc
gtgccgttcctcgagcacgacgacgccaaccgcgcgctcatgggcgcgaacatgcagcgt
caggccgtgccgctgctccgttcgaccgcgccgctcgtcggcacgggcatggaggggcgt
ctcgcccgcgactctggcgtgtgcgtggttgcgcgccgcccgggcgtggtcgagagcgtc
gacgcgacgcgcatcgtggtgcgcgccgagggcgagggcgccgaggtgccggacatctac
cacctcatgaagtaccagcgctcgaaccagtcgacctgctacacgcagaagccgatcgtc
agcacgggtgacgcggtgaaggtgggcgacgtcctcgcggacggcccgtcgaccgacatg
ggcgagctcgccctcggccagaacgtgctcgtcgcgttcatgccgtggcagggctacaac
ttcgaggactcgatcctcgtgtccgagcgcatcgccaaggacgacgtcttcacctcgatt
cacatcgaggagttcgagtgcgtcgcccgcgacaccaagctcggcaaggaggagatcacg
cgcgacatcccgaacgtcggcgaggaggccctgaaggacctcgacgactcgggcatcgtg
cggatcggcgccgaggttcgtcctggcgacatcctcgttggaaagatcacgcccaagggc
gagacccagctctcgccggaggagaagctgctgcgcgcgatcttcggcgagaaggccggc
gacgtgcgcgacagctcgctcaaggttccgccgggcgtgagcggcatcgtgatcaatgcg
cgggtcttctcgcgcaagggcacggagaaggacgagcgcgcgcgcgacatcgaggatcag
gagcgcgcccgcatcgagcgcacgcgcgacgaggagatcaagatcctgcgcgactcgttc
taccgccgggtccgcgagatcctcgtcggcaagacgacgaatggcaagctcgtcgacgac
aagggcaaggtcctcttgcagaagggcgacgagatcgccgaggcggccctgctcgagatc
ccgcgccgttactggggcgagatcccggtcgaggagaccgaccggatccagcagatcctg
cgcgatctggaggacctcgtgcgcacgcgcgaggagcacttccgcgacaagatcgagcgc
ctgtcgaagggcgacgagctgccgccgggcgtgatcaagatggtgaaggtctacatcgcc
atcaagcgcaagctccaggtcggcgacaagatggccggtcgccacggcaacaagggcgtc
atcagccggatcctccccgaggaggacatgccgtacctgcgtgacggcagcccggtcgac
atcgtgctgaacccgctcggcgtgccgagccgcatgaacgtcggccagatcctcgaggtc
cacctcggctggggcgcgctcgagctgggcaagcagctgcagcgcatggtcgaggagcag
cgcgccgcgcacgagatcaaggagcgcatcacggcgatctacggcggcgacgaggaggct
tcggcgctcgtcaggctgatggacgacggggatgtgtcgcgtgcggcgaagaaggtgaag
aacggcgtgttcgtcgcttcgccggtcttcgacggcgcgagcgaggaggacatcaagggc
gcgctcgcgctcgcgggcctgccctcgacgggccaggcgatcctcttcgacggtcgcacg
ggcgaggcgttcgatcagaacgtcacggtgggcatcatgtacatgctgaagctccaccac
ctggtcgatgacaagatccacgctcgttcgatcggcccctactcgctcgtcacgcagcag
ccgctcggcggtaaggcccagttcggcggccagcgcctcggcgagatggaggtttgggcg
atggaggcctacggcgcggcgtacgcgctgcaggagttcctcacggtcaaatccgacgac
gtgatgggtcgtacgcgcatgtacgaggccatcgtgaagggggagtacacgctggaggcc
ggcctgccggagagcttcaacgtgctcatcaaggagctgcagtcgttgtgtctgaacgtc
gagctcgtcgagacgggcctcgaggcttcggccgcggaagaggagtga

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