Prunus avium (sweet cherry): 110744343
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Entry
110744343 CDS
T05161
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110744343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110744343
03036 Chromosome and associated proteins [BR:
pavi03036
]
110744343
Spliceosome [BR:
pavi03041
]
Complex B
Other components
Prp19-related factors
110744343
Complex C
110744343
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110744343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_19
TPR_16
HAT_Syf1_M
Glycos_transf_N
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
110744343
NCBI-ProteinID:
XP_021800008
UniProt:
A0A6P5RDQ3
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSGSRAHDPPAQPPQPIMQQALKRQLAFSSMKPPFSATADYHVFVSLILVFLFTVIETDR
ARRIYKFALDHIPKQRVEDLYKKFVCLEKQYGDRQGIEDAIVGNRRFQYEDEVRKNPLNY
DSWFDYIRLEESAGNKDRIREVYERAIANVPPVPEKRYWQRYICLWINYALYEELDAGDM
ERARDVYRECLQLIPHKKFSFAKIWLLAALLEIRLLNLEGARKILGTAIGKSPKDKIFKK
YIEIELNLGNFNRCRKLYEKYLHWSPENCYAWTKYAELEKSLCETERTRAVFELAITQPA
LDMPELLWKAYIDFELSEGEFERARELYERLLDRTKHLKVWISYAKFEASAIAEAMCSED
QDQDYLCEQTKQCVQRVRRIFEKAFNYFRTSAPELKEERCLLLEEMLNVEASFGDLGDVS
LVQSKLPKKLKKRRPIVTEDGPAGYEEYIDYSFLEEAHTQNLKILEAAYMWKKRKMLECT
RD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctctcgagctcatgacccgccggctcaaccgccccagccgatcatgcagcag
gccctcaagcggcagctcgccttctcctccatgaaaccgccgttttcagctacagcagac
taccacgtttttgtctcattaatcttggtttttctttttactgttattgaaactgataga
gcaaggcgtatttataaatttgcacttgatcatatacccaaacaaagggttgaggatttg
tataaaaagtttgtgtgtttggagaagcaatatggagatagacaaggcattgaggatgcg
attgtgggaaacaggagatttcaatatgaagacgaggttaggaagaatcctcttaattac
gattcctggtttgattatataaggctagaagagagtgcaggaaataaggacagaattaga
gaggtttatgagagagctattgctaatgttcctcctgtgccggagaagcggtattggcag
cgctacatttgcttgtggatcaattatgcactatatgaggagcttgatgctggagacatg
gaacgtgcacgagatgtatatagggaatgccttcaactgattcctcacaagaagttttca
tttgcaaaaatatggcttctcgctgccttgcttgagatacgactgctgaatctcgagggt
gcacgcaagatccttggtactgcaataggcaagtcacctaaagataagatatttaagaag
tatattgagattgagctgaaccttgggaatttcaatcgatgtcggaaattgtatgaaaag
tatctgcattggtccccagaaaattgctatgcgtggaccaagtatgcagagttagagaaa
tctttgtgtgagacagaacggactagggcggtttttgaacttgccatcacccaaccagca
cttgacatgcctgaattgttgtggaaggcatacattgactttgaactatcagagggtgaa
tttgagagagctagagaactttacgagagactcctagaccgaacaaaacacctaaaggtg
tggatcagttatgcgaaatttgaggcatctgctatagcggaagcaatgtgttcagaagac
caggatcaggattatctttgtgaacaaacgaagcaatgtgttcagcgtgttcgaagaata
tttgagaaagcttttaactattttagaacttcagcacctgagttgaaggaagaacggtgt
ctcttgcttgaagaaatgttgaatgtggaggctagctttggagatctcggtgatgttagc
ttagtccagtctaagcttccaaagaaacttaagaagcggaggccaatagtaaccgaagat
ggccccgctggatatgaggaatacattgattacagcttcctagaagaagcacatacccaa
aacctcaagatattggaagctgcctacatgtggaagaagcgaaagatgttagaatgcact
agagattag
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