Prunus avium (sweet cherry): 110748438
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Entry
110748438 CDS
T05161
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04120
Ubiquitin mediated proteolysis
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110748438
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110748438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110748438
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110748438
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110748438
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110748438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
WD40_like
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
U-box
DUF1664
DUF4915
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110748438
NCBI-ProteinID:
XP_021804111
UniProt:
A0A6P5RSY3
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MEECLTGALVPAVKPEPKPSSVEASADPGSNDMDRPAHEKGLTEVDKDLLCPICMQLVKD
AFLTACGHSFCYMCIITHLRNKSDCPCCAQFLSTNQLFPNFLLDKLLKKASARQISKSAS
PVEHFRQALQQGCEVSIKELDTLLTLLAEKKRKMEQEEAERNMQILLDFLNCLRKQKVEE
LNEVQTHLQFIKEDIGAVERRRMDLYRARDRYSVKLRMLGGDDSISGARKSWPSSIDNNT
SSLSGRAGMSSWNLQSKKLDGWGLQKKDALSASDSQYMTQSGLAVARKKRVHAQFDELQE
CYLQKRRQMANQPYTQQERDKNVIQREGYTTGLADFQSVLTTLTRYSRMRVIAELRHGDL
FHPANIVSSIEFDRDYELFATAGVSRCIKVFDFSSVVNDPADVHCPVVEMPTRSKLSCLS
WNKFTKNHIASTDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSCTEPTRLVSGSDDCK
VKVWCTRQETSVLDIDMKANICCVKYNPGSSNCIAVGSADHHIHYYDLRNPSQPLHVFTG
HKKAVSYVKFLSNYELASASTDSTLRLWNVKENIPVRTFKGHTNEKNFVGLTVNGEYIAC
GSETNEVFVYHKEISKPVTWHRFGSPDLDDTDDDAGSYFISAVCWKSDSPTMLTANSQGT
IKVLVLAA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtgcttgactggggctctagtcccggcggtgaaaccagaaccaaagccatca
agtgttgaggcttcggcagatccagggagcaatgacatggatcgtccagctcatgagaaa
ggattgacggaggtggacaaggacttgttgtgtccaatttgcatgcagctggtaaaggat
gccttcctcacagcatgtggtcacagcttctgctacatgtgcatcattacccaccttcgc
aacaagagtgactgcccttgctgcgcccagttcctcagcaccaaccaattgttccccaat
ttcctgctggataagcttctgaagaaggcatcggcccgtcaaatttccaaaagtgcgtcc
cctgtggagcattttcgtcaggcattgcaacagggatgtgaagtgtccatcaaggagcta
gacaccctgttgacactcctggcggagaagaagaggaaaatggaacaagaagaggcggag
agaaatatgcaaatactgctcgacttcttgaattgcctaaggaagcaaaaagttgaagag
cttaatgaggtccaaacccatcttcaatttattaaagaggacataggtgccgtagagaga
cgcagaatggacttgtaccgtgcgagggacagatactccgtcaagctgcggatgcttgga
ggggatgattctatttctggtgcaagaaagtcatggccttcctccatagataacaacacc
agttctctcagtgggcgagcagggatgtcttcatggaatcttcaatctaagaaacttgat
ggctggggacttcagaaaaaggatgctttaagtgcatcagactcccagtatatgactcaa
tctggtctagctgtagccagaaagaagcgggtccatgcacagtttgatgaactacaagag
tgttacctgcaaaagcgacgccagatggcgaaccaaccatatacccagcaagaacgggac
aaaaatgtgatacaaagagaaggttacactacaggccttgcagattttcaatcagtgctc
actacgttaacgcggtatagtcggatgagggtcattgctgaacttaggcatggggatcta
tttcacccagctaatatagtatcaagcattgaatttgaccgtgattatgaattgttcgct
actgctggggtttcacggtgcataaaagttttcgacttctcctcagttgtgaatgatcca
gctgatgtgcattgtcctgttgtggagatgcctacacgttcaaagcttagttgcttgagc
tggaacaagtttacgaaaaaccatatagctagtactgattatgagggaatagtaacagtt
tgggatgtaaatactcggcaaagtgtcatggagtatgaagagcatgaaaaacgtgcttgg
agtgttgatttttcatgcacagagcccactaggcttgtatctggtagtgatgattgtaag
gtaaaagtttggtgcacaaggcaggaaactagtgttcttgacattgacatgaaagcgaac
atttgttgtgttaagtataatcctggatcaagcaactgcattgcggttggttcagcagac
catcacatccactattatgatttaagaaatccaagccaaccactccatgtgttcaccggg
cacaagaaagctgtttcttatgtgaaattcttgtcaaactatgagcttgcctctgcatcc
actgatagcacactgcggttatggaatgtgaaggaaaatattccagttcgtacgtttaaa
ggtcacacaaatgagaagaacttcgtaggtctaacagtaaacggggaatacattgcgtgt
ggcagtgaaacgaatgaagtgtttgtgtatcataaggaaatttccaaacctgtgacttgg
catagatttggatcgcctgatttggatgacaccgatgatgatgcagggtcttacttcatc
agtgctgtatgttggaagagtgatagccctaccatgctaactgctaacagtcagggaacc
attaaagtgctggttcttgctgcttaa
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