Prunus avium (sweet cherry): 110752331
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Entry
110752331 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110752331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110752331
03036 Chromosome and associated proteins [BR:
pavi03036
]
110752331
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110752331
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110752331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
DUF7874
Motif
Other DBs
NCBI-GeneID:
110752331
NCBI-ProteinID:
XP_021808646
UniProt:
A0A6P5S566
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MGSRSILVGMEVPIIGSDSLKWIDVPVSSSSSGPSDASAFASTDAPCVPPVTDDCASSIA
IGEPPTYLIWKIHKNLPHALELLELSASKDFSKVGLRITFPDALSPLLLLCKNEIDVGSK
SHPYLLYALTVSGVAYLLRLGPISTYVSRSGFRLDELVEFNVNAYGPVTSAAATPSGCLV
LGRGDGSLACLQLGSLDPSAPGFVRELRDDSGIGRLWGFMSRGRMLGAVQDLVISVVHGK
PLVFVLHSDGMLRVWDLSCHSRLFSNNMNSPTLAGATLVRLWIGQVDSDSNMIPLAILYR
HTSDISSETIYAYSLRCNFGDRFLLMLEPSAINIPLEEVGWVDVKLTSDKICILKNNGLV
LHNLLTNVNTEDACSYALQEDFVADQLFQSSEHSSDDLLLLTHSVFSSSKDHIVQVVSST
FLRRLLLPGVYHSIALRSTLLDYNRHWSDSDFQSLTADMLKKEILSVIEHEGVNDNSTSI
FCCWKNLCSRYFQNWCKSNAPCGLLVDSSTGTFGLVRKNSVSFFRCLEDIERLNDGICDD
LGDLVGFGLDLFDDAPEFEVLVEMLRCVVNVSQQLGKTASAIFYESLLSAPPVISPEEIT
RRLLKILETGYSSTVSMLHISDLGPDVAWEKSLADHKNLRKFSIDMLLSLHALHKKSGTW
SRILNAIESYLKFLIPQKIVQKFDAEISLDISASIVVQATSQVAKVMFESALDILLFLSY
LVSISGQIHMLHDDISKIQLDLIPMIQEFISEWLLIHFFATTPSEPAAIEDFSSQLSLLQ
IDSNMGKRSLNEKLGKCEFTLAFIFILNIRSSSRDQNRLSSRSIPDMHDIIISMRDFASW
IIWGHAGDCFTFLSRATDLALILLRHGQYDAVEHLLTIVEAHLQKEKTSHSIQDTEGGWC
ILHHLLGCCFLSQAHRGLHGVLKDRKINEAVRCFFRASSGKGSSEALRSLPQELGLPDLG
FTGSISAAAWRLHYYQWAMQIFEQYNISEGACQFALAALEQVEEAFNEKDEFHGQDSINE
SVSTIKGRLWANVFKFTLDLNLFYDAYCAIISNPDEESKYICLRRLIIVLYERGAIKILC
GGQLPFIGLTEKVEQELARKADCSDVLAKPNLYKLLYAFEMHRHNWRRAASYMYLYSVRL
RTETALKDYQNTSLALKEILNGLSAAINALHLVHPAYAWIDPLPERSYLHNEQYPSKKAK
ITIDEQTASNDVHPQTGKSYIDIEKIENEFVLTSAEYLLSLAHVKLTSSGTQKTPLEVVD
LLIQANLYDMAFTILLRFLKGSELKRGLERVFSAMSLKCCCPHRVDSSWVGDDPRAHGLL
LTSLKDEVVVHGSPDTNQQSKGISQWGTLELYLEKYKVFHARLPQVVAETLLRTDPQIEL
PLWLVKMFKDGRRERTWGMTGQESNPALLFQLYVDYGRYREATNLLLEYIGSFASMRPAD
IINRKRPCAVWFPYTAVQRLWCQLEEMISLGHMVDQCNKLKNLLHGALLSHLELVKVDSE
DVLSAFS
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtagatcgatactggtaggcatggaggtcccaatcattggcagcgattcattg
aaatggattgacgtccctgtttcttcttcttcttctggtccttctgatgcctctgccttc
gcctccactgatgctccttgcgtccctcctgtcaccgacgattgcgcctcttccatcgcc
attggagaacctcctacatatctcatatggaaaattcacaagaatcttcctcatgctctc
gaactacttgagctcagtgcttctaaagacttctccaaagttgggcttcgaatcactttt
ccagatgcgctctctcccttgcttcttctttgtaaaaatgagattgatgtaggttctaag
agccacccctacttgctttatgcattgactgtctcaggggtcgcttaccttttgagactt
ggacccatctctacttatgtatcccgctctggtttccggctggatgagcttgtggagttt
aatgtcaacgcctacggaccagtaacaagtgctgcagcaacaccatctgggtgccttgta
cttgggcggggtgacggatcccttgcttgtctccaactgggctcacttgacccctctgct
cctggttttgtgagggagctgcgggatgattcgggaattggtcgtttgtggggtttcatg
tcaaggggtaggatgctaggggctgtgcaggacttggtgatatcagtcgttcatggaaag
ccacttgtatttgtgcttcattctgatgggatgttacgagtgtgggatctttcatgccat
agcaggctctttagtaataacatgaacagtccgacactggcaggtgctacattggtaagg
ttatggattggtcaagttgacagtgattcaaacatgattcctttggcaatcttgtacagg
catacttcggatatcagctcagagacgatctatgcatatagcctccgttgtaattttggg
gatagattccttttaatgctggaaccttcagcgataaatattcctttggaggaggttgga
tgggttgatgtcaaacttacttccgacaagatatgcatactgaaaaataatggattggta
cttcacaacttgttgacgaatgtcaatacggaagatgcatgttcttacgccttgcaggag
gacttcgttgcagatcaattgtttcaaagttctgagcattcttcagatgaccttcttttg
ttaacacattcagtattctcatcttcaaaggatcatattgtacaagttgtatcttcgact
ttcttacgcaggctgcttcttcctggggtttatcatagcattgccttgcgctcaactttg
ctggattataataggcactggagtgattcagatttccagtccttaactgctgatatgttg
aagaaggaaatcctttccgtcattgaacatgagggtgtcaatgataattcaacgtcaata
ttttgctgctggaagaatttatgttctcgctactttcaaaactggtgcaagagcaatgca
ccatgcggtttgcttgttgattcctccacgggcacttttggtttggtcagaaagaattcg
gtatctttttttcgttgtttggaggatattgagcggcttaatgatggcatttgtgatgac
cttggcgatcttgttggctttgggttggatttatttgatgatgctcctgaatttgaggtg
ctcgttgaaatgctcagatgtgttgttaatgtcagccaacaattgggcaaaacagcttcc
gctatattttatgaatcactcctcagtgcaccaccagttatatcacctgaggagattact
cgtcgcctattgaagattttagagactggatatagttcaacagtatcaatgcttcatata
tcagatcttggacctgatgttgcttgggagaaaagcctggcagatcacaaaaatttgagg
aaattttcgatcgacatgctgttatctcttcatgctttgcacaagaaatctggcacatgg
agtcgaatcttaaacgcgattgagagttatctaaaatttctcatacctcagaaaatcgtt
caaaaatttgatgctgaaatatcattggatatcagtgcttccatcgtggtccaggctact
tctcaagttgcgaaggttatgtttgagtctgcactggacattcttctgtttctaagctat
ctagtgagcattagtgggcagatccatatgctgcatgatgatatatccaaaattcaactt
gacttgattccaatgattcaagaattcatttctgagtggcttcttatacatttctttgcc
accacgccgtctgaaccagctgctattgaagatttcagttcccaactttcattattacaa
attgatagcaacatgggcaaaagatcattgaatgagaagcttgggaagtgcgagttcact
ctggcttttatattcatactaaatattcgaagttcctccagagaccaaaaccgcctctct
tcaagaagcataccagacatgcatgacattattatttcaatgcgggacttcgctagctgg
atcatttggggccatgctggggattgctttaccttcctcagccgtgcaacggatcttgct
ttgatcctcctaaggcatgggcagtatgatgcggttgagcacctactcactattgtggag
gcacatttacaaaaggagaagacatctcatagtatccaagatacagagggaggatggtgc
atacttcatcatcttttaggatgctgcttcctttctcaggcacaccgtgggttgcatgga
gtactgaaagacaggaaaatcaatgaagctgttcgttgtttcttcagagcttcatctgga
aaagggtcatctgaggctttacggagtttgcctcaggaattggggttgccagatcttggt
tttactggtagcatatcagctgcagcatggaggctccattactatcagtgggctatgcag
atatttgagcaatataatattagtgaaggtgcatgtcagtttgctcttgctgcgcttgag
caagttgaggaagcttttaatgaaaaagatgagttccatggacaagactcaatcaatgaa
tcagtatctaccatcaaaggacgactttgggcaaatgtcttcaagtttactttagatctt
aatctcttttatgatgcatattgtgcaataatttcaaacccagatgaggagagcaagtac
atctgcttgaggcgtctgataattgttctttatgaacgtggtgccataaagattctttgt
ggtggtcagctaccgttcattggccttacagagaaggtagagcaagagcttgccaggaag
gcagattgttcagatgttttggcaaagccaaacttatataagttgctttatgcatttgaa
atgcatcgacataactggagaagagcagcaagctacatgtacctatattctgttcgtttg
agaacagagacagctctgaaagattaccagaacacgtcactggcactaaaggagatcctc
aatgggctctctgctgctatcaatgcacttcatcttgttcatcctgcctatgcttggatt
gatcctctacctgagagaagttatcttcacaatgagcagtatccgagtaaaaaggctaaa
attaccatagatgaacaaactgccagcaatgatgttcaccctcaaacagggaaatcttat
attgatattgagaaaattgagaacgagtttgtgcttacttcagcagaatatttgctttca
ttggcacatgtcaagttgacatctagtggaacccagaaaacaccactggaggttgttgat
ctcctgatccaggcaaatttatatgatatggcatttacaattcttttaagattcttaaaa
ggttcagagttaaagaggggattggaaagagttttctctgccatgtcattgaaatgctgc
tgtccacatagagttgattcttcatgggtcggggatgatcccagagcacatggtcttctg
ttgacttcattaaaggatgaagtagttgttcatggttcacctgatacaaatcaacaatct
aagggaatcagtcaatggggaactcttgagctttatcttgaaaaatataaagtgttccat
gcccgtttaccgcaagttgttgctgaaactcttcttcgtacggatcctcaaattgaattg
cctctttggctggtaaagatgttcaaggatggtaggcgggaaaggacttggggcatgact
ggccaagaatcaaatccagcgttattgttccaactatatgttgattatggtcgatataga
gaagctacaaatcttttgctcgagtacataggatcgtttgcatcaatgagaccagctgac
ataatcaatcgtaaaagaccatgtgcagtttggtttccatacacagcagttcagcgtctg
tggtgccaacttgaggaaatgatcagtttgggccacatggtagatcaatgtaacaagctg
aaaaacttattacatggagctttgctgagccatcttgaactcgtaaaggtggactcagaa
gatgtactctctgcttttagttga
DBGET
integrated database retrieval system
