Prunus avium (sweet cherry): 110752801
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Entry
110752801 CDS
T05161
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110752801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110752801
Enzymes [BR:
pavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110752801
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110752801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110752801
NCBI-ProteinID:
XP_021809223
UniProt:
A0A6P5S605
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MRTMNRGQAKTLIFTKQPFIEDEGHRKIEKWQFSAMSDTEIVNMAETQIYKCNYYDPNQK
PIEGGLLDPRLGPANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTIVDILKCI
CKLCSGILLEEGMRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLATNYRPVKCSKCGFI
NGSVKKAVGVLGIIHDRSKLNGVMDDFRTTLSHTKESKASFNVATHMLNPARIYSLFKRM
VDEDCELLNLSNRPENLIMKNIAVPPIAIRPSVIVDRSLSNENDITERLKRIIQSNAILR
RDLLEAKSAPKCLASWDILQVEVAQYINSDVRGVPFSMQTAKPLSGFVQRLKGKGGRFRG
NLSGKRVEYTGRTVISPDPNLKITEVGIPIKMAQILTYPERVSHHNIEKLRQCVSNGPDK
YPGARMLRNPDGTEWSLKVNRKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCH
RAKVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGE
VLVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQ
LFSVLVRPNSNVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQLGKGTL
GNGNKDGLYSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDILYNEKEK
IIKEGYNKCAGKIELYNEGQLPLEPGCDAAQSLESGITKILNNIRDQTGKLCMQTLHWRN
SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNAKTPAAKGFVA
SSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNASG
CIVQFCYGDDGMDPAMMEGEGGAPLDFRRLFLKAKATCPAGENESLSLEEVSEIVKDRLS
KQDMTPDHGCSAGFKSSLEEFLDKYAKALRKTHDTFVLDQSPAWKEKSASLEKIVQNISG
VTCKQLEVFLNTCISRYHSKKVEAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTL
GVPRIKEIINGAKKISTPIVTAILEHNNNAKFARVVAGRIEKTILGQVSKSIKIVMTSRS
ASIVITLDMVMIQDAHLSIDANVVKESILRTPRIKLKQEHVKVLDIRKLEILPQEADRSR
LHFNLYYLKSMLPKVIVRGISTVQRVVIDAKEVKKNKKDLEVTCADGDKREEKEYKLFAE
GTGLLAVMGTEGVDGCKTTSNDVMEVQRTLGIEAARVCIIEEIKHTMKSHGMNIDDRHMI
FLADVMTYRGEVLGITRFGVQKMDKSVLMMASFERTDDILFNACVNGRVDKVEGVSESII
MGIPMQIGTGIFKVRQRVSSDLRQPTYLGPNSDVELHYGPRPSLT
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgatgaatagaggccaagccaagaccctaatcttcaccaaacagcccttcatc
gaagacgaagggcatcgtaaaatagaaaaatggcaattcagcgccatgtccgacacggag
attgtcaatatggctgaaactcaaatttataaatgcaattattatgatcccaatcaaaag
cctatcgaaggcggcttattggacccccgcttgggcccagcaaataagagtagtggtgag
tgtgcgacatgtggtgcggtaatgaaggactgtccagggcactttggattcttggtgctt
gccctccctgtcttgaatgttggatatttaagtactattgtggacattttgaagtgcatt
tgcaagttatgttctggcatacttttggaggagggaatgcgcaatgactttttgaagaag
atgagaagtcccaagatggagcctttgaggaaaactgagttgatgaaaaagatagtgaag
aagtgtaataacttggcaaccaattatagaccagtgaagtgctccaaatgtggatttata
aatggttcagtgaagaaggccgtgggtgtgctgggcattattcatgatcgttcaaaactt
aatggtgttatggatgactttcgaacaacactttctcacacgaaagagtcgaaggcatcc
tttaatgtggcaactcatatgctaaaccctgctagaatttattctctgtttaaaaggatg
gttgatgaggactgcgagttgcttaatctttcgaatagaccagagaacctcatcatgaaa
aacattgctgtgccacctatagctattcggccttctgttattgtggatagatcactgagc
aatgaaaatgacattacagagaggttaaagagaattattcaatccaatgctattcttaga
cgggatttattagaagcaaaatctgcacccaaatgtttggctagttgggatatacttcaa
gttgaggttgcacagtatataaatagtgacgttcgtggtgttcccttttccatgcaaact
gccaagccattgagtggttttgtgcagcggctcaaagggaagggggggcgctttcgtggt
aatttatcagggaagcgtgttgaatatactggcagaactgttatatcacctgaccctaat
ttgaaaatcactgaggttggaatccctatcaaaatggctcaaatattaacttatccagaa
cgtgtttcccatcataatattgagaagttgaggcagtgtgtcagtaatggacctgataag
taccctggtgccagaatgctcagaaatcctgatggcactgaatggtccttaaaggttaac
agaaagaatgctgctgatggactcaaatatggtgacatagttgaacgtcatctagaagat
ggggacattgttcttttcaacagacaaccaagcttgcatcggatgtctatcatgtgccat
agggctaaggttatgccttggagaacattgaggtttaatgaatctgtttgcaacccttac
aatgctgattttgatggtgatgaaatgaatatgcatgtcccacaaacagaggaggctcgg
acagaggctgttatgttgatgggggtgcaaaacaatctatgcactccgaaaaatggagaa
gttttggttgcttccactcaagattttctaacatcctctttccttataacaaggaaggac
acattttatgaccgtgcatccttttcactcatgtgttcatatatgggggatggaacggat
cctgttgacttgccaacacctgctgtaattaagccaatagagctatggacgggaaagcaa
ttatttagcgttctagtacgcccaaattcaaatgtgagagtctatctaaattttactgtt
aatgagaaatcatacagcaagactgaagatggaggacctgaagcaatgtgcccaaatgat
gggtttgtttattttcgtaacagtgagctcatagctggccaacttgggaagggtacttta
ggaaatggcaataaggatggactttactctgtacttctcagagactataaagctcatgcg
gctgcttcttgcatgaatcgcctcgctaagttaagtgctcggtggattggtaatcacgga
ttctcaattgggattagcgatgtacaaccaagtgacattttgtacaatgaaaaggaaaag
ataattaaggaaggttataacaaatgtgctggtaagatagagttatataatgaaggacag
ctaccacttgaacccggttgtgatgcggcacaatcacttgagtctgggataactaaaata
ttaaacaatattagagatcaaactggaaagttgtgcatgcaaacgctacattggagaaac
agtcccttgatcatgtcccagtgtggttctaaaggatctcctatcaatattagccagatg
attgcctgtgttggtcaacaatcggttggtggtcgtcgtgcacctaatggattcatagat
cgaagccttcctcacttccctagaaatgcaaaaacccctgcagctaaaggctttgttgct
agttccttttacagtggcttgacagctacagagttctttttccatactatgggcgggcga
gaggggcttgtcgatacagctgtgaaaacagctgacactgggtacatgtctcgtagattg
tcgaaaattttagaggacctatctgtccagtatgataacacagtacggaatgcaagtgga
tgcatagttcaattttgttatggggatgacggtatggatcctgcaatgatggaaggagaa
gggggagctcctttagattttcgtcgattgtttttgaaagctaaggccacatgtcctgct
ggagaaaatgaaagcttgtcccttgaagaagtgtctgagatcgtgaaagaccggctttca
aaacaagatatgactcctgatcatggttgctctgcaggtttcaaaagttctttagaggaa
ttcctggataaatatgcaaaagcattaagaaaaacacatgatacttttgtgttggatcaa
agtccggcttggaaggaaaagtctgctagtctggagaagattgtccaaaatatttctggt
gttacttgtaaacagctcgaggtttttctcaatacttgcatttctcgttatcattcaaaa
aaagtcgaagctggaacagcaattggagtaattggagctcaaagtattggcgaacctggg
acacagatgacactgaaaacttttcactttgctggggttgcaagcatgaacgttacactt
ggagtccctcgtatcaaggaaataataaacggagcaaaaaagatcagtacacccattgtc
actgcaatacttgagcataataataatgcgaaatttgcacgggtagtggcaggtcggatt
gagaaaacaattcttgggcaggtctctaagagtataaaaattgtaatgacttcaagatcg
gcatccatagtcatcactcttgatatggtcatgattcaagatgcacacttgtctatagat
gctaatgtcgtaaaagaatcaattttacgaactccgagaatcaaactgaagcaagagcat
gttaaggttttggatatcagaaaattggaaatccttcctcaggaggctgatagaagtaga
ctccattttaacctctactatttaaagagtatgctcccaaaagttatagtaaggggtata
agcactgttcaacgtgttgtcattgatgcaaaagaagttaaaaagaataaaaaggatctt
gaagttacatgcgctgatggtgataaaagagaagaaaaggagtacaagttgtttgcagaa
ggcacgggtcttctggcagtaatgggcactgaaggagttgatggttgtaaaaccacaagt
aatgatgttatggaagtgcagcggacacttggaattgaagctgcgagagtttgtatcatt
gaggagataaagcatactatgaaatcgcatggaatgaacatagatgatcgccatatgatt
tttttagcagatgtgatgacgtatcggggtgaagttcttggaatcacaagattcggtgtt
cagaagatggacaaaagtgttttgatgatggcttcatttgagcggacagatgatattcta
tttaatgcatgcgtaaatgggagagttgacaaggttgaaggagtaagtgaaagcataatc
atgggtataccaatgcagataggcactggaatatttaaagttagacaaagagtttcttct
gatttgaggcagcccacatatttgggaccaaattcagacgtggaactgcattacgggcca
cgcccaagtctaacttga
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integrated database retrieval system
