Prunus avium (sweet cherry): 110755296
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Entry
110755296 CDS
T05161
Name
(RefSeq) uncharacterized protein LOC110755296
KO
K18734
protein SMG8
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110755296
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110755296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
110755296
NCBI-ProteinID:
XP_021812169
UniProt:
A0A6P5S8P9
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MDTPNPNPNPNPSSMRVLVRPPPSPTTFTPTSYSPSQTLPVPSSSDPPSSDGVVVVGFIG
RSPDDSAQLINRILDFNVFGSGNLDKSLCLEKEELRDWFRWRRISYFHEQQKGILFLQFC
STRCPAMDDGFSESGSGFDSPVEEHDFGDLQGLLFMFSVCHVIIYILEGSRFESQLLKNF
RVLQAAKHALAPFVRSQTLQPTPSRPPSSLSSARPTTSTTSTNNSSQGRSGSILNRNASS
ISLMSGLGSYTSLFPGQCTPVTLFVFIDDFSDVPNPSSNVEESSDTSSHNQSSSLGSLAR
PSLPVKGSGSVVVLARPVSKSEGSFRKKLQSSLEAQIRFLIKKCRTLSGSETSHAGSRSG
GASSAAPLFSLDASRAVLLLDRCTNQRGESLEFATGLVEDVLNGKGTSDSLLLESHGQSA
SKEDIISVKEFIVRQSDILRGRGGLVSNSSSGGVGMAAVAAAVAAASAASATSGKTFSTP
ELPNFQIWLSSSQQILHGVLSAKGGCIDETEFSKRKPRLRNTVPQIVEGISSKGLDPLDL
AVSWLESGKKLNTKFSTLWCERTLPAAKEVYLKDLPACYATSQHEAHLEKALHAFHSMVK
GHAVQRFAKKLEDECTSIWKSGRQLCDAISLTGKPCMHQRHEVETSESLSGAPVKQHSSG
YVFLHACSCGRSRRLRSDPFDFESANITFICFPDCDKHLPTLQLPEVNNTGPIQPSSWSL
IRIGGAKYYEPSKGLLQSGFSSSQKFLLKWTIFLEKQKSPNDLPVSAVLQGSVDTSDTNL
KFESKADVQLYTGDLKSGVGSLRKPAEDIVSDDNKISFGKGLPNFTMRKAFSEVVAGTAG
ADSGFPPIQQRKTSSGLDNSINKTRTRDQIVERTSDKGPRKSEDVVSVQEKFSRISSTNG
DPYLRIGSNVVPVNLNGSERLKMNPSLKHVVVYVGFEHECPHGHRFLLNPEHLSELGSSY
QLPEESLENSDHSLPESFKVNGNGFHAKVHRNSNRMTVTAANKERRVNKSKEIVTNGNLN
FDGLIQFSGPGKEQNQTSSSASALPNFSKRLEGSFQSISLDDGGSAFSMLNRNLPIYMNC
PHCRHSRDKQNPPKTKFAGTISQLQRIFVVTPPFPVILATCPVIQFEASCLPLSVPEREQ
KLQFTLGCQVVLPPESFITLRLPFVYGVQLEDGSLRSLNCLEHQPEVTAWITKGTTLQVM
SKRNCVGQDEFLT
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggacactcccaacccaaacccgaacccgaacccatcatccatgcgggtcctagtccgc
ccacctccttcacccaccacattcacacccacttcctattcaccctcccaaacccttccg
gtaccctcctcctcagaccctccttcctccgacggcgtggttgtcgtgggcttcatcggg
cggagccccgacgactcggcccaactcatcaaccggatcctcgacttcaatgtgttcggg
tcgggcaatcttgataaaagcctctgtcttgagaaagaggagctcagggactggttcagg
tggcgaagaatcagttacttccatgaacagcaaaagggcattctgtttttgcagttctgc
tccactcgctgccccgccatggacgatgggttctcggagtccgggtcgggttttgactca
ccggtagaagagcacgactttggggaccttcaggggctgttgttcatgttctctgtttgc
catgtaatcatatatattctggaagggtcgcggtttgaatcccaactcctgaaaaatttt
cgtgtgttacaagctgccaagcatgctttggctccatttgtgaggtcccaaactttgcag
ccaacaccatccaggccaccttcatcattatcatctgcgcggcctaccacatccacaacc
tccactaacaattcttctcaaggtagaagtggtagcatcttgaatcgcaatgcttcttcc
atttcactaatgtcaggtttaggttcctacacttctttgtttccaggacagtgtacccca
gtcacactgtttgtatttattgatgatttctctgatgtgccaaatcccagttctaatgtg
gaggagtcgtcagatacatcctcacataatcaatcttctagtttgggcagtttagcaagg
ccaagcttacctgttaaaggttctggttcagtggttgtgcttgcacgccccgtgagtaaa
tctgagggtagttttaggaagaaactgcagtcatcacttgaagcacagattcgtttctta
attaagaagtgtagaacactctcaggttctgaaacaagtcatgcagggtcaagaagcggg
ggggcttcaagtgctgcacctttattctcacttgatgcatcaagggctgttctgttgtta
gataggtgtacaaatcagaggggtgaatctcttgaatttgccaccggacttgtggaagat
gttttgaatggaaagggaacctcagattctcttctgcttgaaagtcatggtcagagtgca
agcaaagaggatatcatatcagtgaaggagttcattgtcaggcaatctgatattctaaga
gggaggggaggactggtaagtaattccagtagtggtggtgttggtatggctgctgttgct
gcagctgtcgctgctgcatcagctgcatcagctacttctggaaagacgttttctactcct
gaacttccaaatttccaaatttggttatcttccagtcaacaaattcttcatggagttctt
tctgcaaaaggcgggtgcatagatgaaactgaatttagcaaaagaaaacctcggctaagg
aacactgttccacagattgttgaaggaatttcttcaaaaggtttggatcccctagattta
gcagtatcttggttggaaagtggtaaaaagctgaacacaaaattttcaactttgtggtgt
gaaaggacccttccagctgctaaagaggtttatctgaaagacttgcctgcttgttacgca
acttcacagcatgaagcccatctagagaaggctttgcatgctttccactcaatggtaaaa
ggacatgcagtgcaacgttttgcaaaaaagctggaggatgaatgcacatccatctggaaa
tctggaaggcaactgtgtgatgccattagtttgactggaaaaccatgtatgcaccagaga
catgaggttgagactagtgagtcgctttcaggggctcctgtgaagcaacattccagtgga
tacgtgttccttcatgcatgttcttgtggtcgatcccgaagactacgatctgatcctttt
gactttgaatcagcaaacattactttcatttgctttccagactgtgacaagcaccttccc
acacttcaattacctgaagtaaataatacagggcctattcaaccttcctcatggagtttg
attcgcattggtggtgcaaagtactatgaaccttctaagggtttgcttcaaagtgggttc
tcttcctctcagaagtttcttttaaaatggacaatatttttggaaaaacagaaaagccca
aacgacttacctgtcagtgcagtgcttcaaggttctgtagatacatcagatacaaacctg
aagtttgaatctaaagctgatgtacagttgtacacaggggatttaaaatctggagttgga
agtcttagaaagcctgcagaagacatagtgtctgatgataataaaatcagttttggtaaa
ggtcttcccaactttactatgagaaaagccttttctgaggtcgtcgctggaacagcaggt
gcagattcaggatttcctcctatccagcagagaaaaacttcatctggtttagataatagt
atcaataaaactaggacaagggatcagattgtagaaaggactagtgataaaggacctcgg
aagtctgaagatgttgtatctgttcaagagaagtttagcaggattagcagcacaaatggt
gacccctatctacgaataggtagtaatgtagttcctgtgaacctgaatggcagtgaaagg
ctcaaaatgaacccttctttaaaacatgtagtagtgtatgttggattcgagcatgagtgc
ccccatggccaccgttttctattaaatcctgagcatcttagtgagcttggatcctcatat
caattgcctgaagagtctctggaaaactcggaccatagtttgccagagtctttcaaagtc
aatgggaatggtttccatgctaaagttcatcgaaattcaaataggatgactgttactgct
gcaaataaggagagacgtgtaaataagtcaaaagagatagtaactaatggtaatctgaat
tttgatgggctaatacagttctcaggaccagggaaggagcagaatcaaacatcttctagt
gcatctgcactcccaaatttttccaaacgtcttgaagggagctttcagtctattagtctt
gatgatggtggaagtgctttctccatgttgaatagaaatttaccaatctatatgaactgc
ccacactgcaggcactctagggataagcaaaatccaccaaagactaagtttgctggcaca
atatcacaacttcaaaggatttttgtggtcacacccccctttccagtgatattagctact
tgcccagttatacaatttgaggcatcatgtctacctctgtcagtcccagaacgtgagcag
aagttgcagttcacccttggatgccaagtggttttacctccagagagttttattaccctt
agactcccatttgtgtatggtgtgcaactggaggatggaagtttacgttctcttaattgt
cttgaacatcaaccggaagtaacagcttggattaccaaaggaacaacattgcaggtcatg
tccaagagaaactgtgttggtcaagatgaatttctcacctag
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integrated database retrieval system
