Prunus avium (sweet cherry): 110759034
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Entry
110759034 CDS
T05161
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110759034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110759034
03110 Chaperones and folding catalysts [BR:
pavi03110
]
110759034
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110759034
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110759034
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110759034
Messenger RNA biogenesis [BR:
pavi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110759034
Chaperones and folding catalysts [BR:
pavi03110
]
Heat shock proteins
HSP60 / Chaperonin
110759034
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110759034
Exosome [BR:
pavi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110759034
Exosomal proteins of other body fluids (saliva and urine)
110759034
Exosomal proteins of breast cancer cells
110759034
Exosomal proteins of colorectal cancer cells
110759034
Exosomal proteins of bladder cancer cells
110759034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
GSPE_N1E
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
110759034
NCBI-ProteinID:
XP_021816736
UniProt:
A0A6P5SSY4
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MASTFAAMTSVGSLAAPCSRVIDRKFDNLSSRASISPFSFSRRHNVVLRRTRSPRICAMA
KELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVE
LEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIE
KTTKALVHELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGKS
AENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEEAIR
GGYPVIIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIR
EEVGLTLDNVGKEVLGHASKVVLTKDTSTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYER
EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAIKETLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYN
AATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEAAVPAGNPMDN
SGYGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacttttgcagccatgacttcagttggctccttggctgctccttgtagccgc
gtgattgataggaaattcgacaacttgtcatctcgtgcgtccatttctccattctcattc
tctaggaggcacaatgtagttctaaggaggacacgatctcctaggatctgtgccatggcc
aaggagttgcatttcaacaaggatggttcagccattaagaaactacaaactggtgtcaac
aagcttgccgaccttgttggggttacacttggtccaaagggtaggaatgtcgttctagag
agcaagtatggctcccccaaaattgttaatgatggtgtgactgtcgcaaaagaggttgag
ttggaggatcctgttgagaacattggagctaagctagtgagacaggcggcagccaagact
aatgacctagctggtgatgggacaacaacatctgttgttcttgcacaaggtcttattgct
gaaggtgtcaaggtggttgcagctggggctaaccctgttttaatcacacgtggcattgag
aagaccaccaaagctctggtacacgagcttaagtcaatgtccaaagaggttgaagacagt
gagctggcagatgtggcagcagttagtgcaggaaacaactatgaagtaggaaacatgatt
gctgaagctttgagcaaggtgggtaggaagggtgtggtgacccttgaagagggaaaaagt
gctgagaacagcctctatgttgtagaaggaatgcaattcgatcgtggttatatctcacct
tatttcgtcactgacagtgagaaaatggccgttgaatatgagaactgcaagttgcttctt
gttgataaaaaaataacaaatgcaagggacctcattaacattttggaggaagctataaga
ggaggatacccagttataatcattgcagaagacattgaacaagaagctcttgcaactctt
gttgtaaacaagcttaggggagctctaaagattgctgcccttaaagctcctgggtttggt
gagcgcaagagccagtaccttgacgatattgctattctgactggaggaactgtcatcaga
gaggaggtagggctcacattagacaatgttggaaaggaggtccttggccatgcttcgaaa
gtggtgcttacaaaggatacctccacgattgttggtgatggaagtacccaggaagctgtt
aacaagcgagttgcccaaattaagaaccttattgaggcggcagagcaggactatgaaaga
gaaaaacttaatgaaaggattgcaaaactatccggtggtgttgctgtaattcaggttgga
gcacaaactgagacagagctgaaagaaaagaaactgagagtcgaagatgctctgaatgca
acaaaggcagctgttgaggaaggtattgttgttggaggtggatgcacccttctgaggttg
gcatcaaaggttgatgcaatcaaggaaactcttgataatgatgaagaaaaggttggggca
gatatagttaaaagagctcttagttaccccctgaagttaattgccaagaatgctggtgta
aatggaagtgtcgtcagtgagaaggtgctttccagtgacaatcctaagtacggatacaat
gctgctactggaaactatgaagatttaatggctgctggaattattgatccaaccaaggtg
gtgagatgttgcctagaacacgcatcctctgttgcaaaaactttcttaatgtcagactgt
gtagttgttgagattaaagagccagaagcagcagtgcctgctggcaaccccatggacaat
tcaggctacgggtactag
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