Prunus avium (sweet cherry): 110760627
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Entry
110760627 CDS
T05161
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110760627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110760627
03036 Chromosome and associated proteins [BR:
pavi03036
]
110760627
Spliceosome [BR:
pavi03041
]
Complex B
Other components
Prp19-related factors
110760627
Complex C
110760627
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110760627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
HAT_Syf1_M
TPR_8
TPR_17
TPR_15
Mad3_BUB1_I
BTB_2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
110760627
NCBI-ProteinID:
XP_021818620
UniProt:
A0A6P5SP23
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MGSFKDADPTLGFLTRKETEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPK
QKITDPTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFKRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEIIGNVAGARQ
IYERWMNWMPDQQGWLSFIKFELRYNEVERARAIFERFVQCHPKVGAWIRYAKFEMKNGE
VVRARNVYERAVEILAEDEEAEQLFVAFAEFEERCKETDRARSIYKYALDHIPKGRAEDL
YKKFVGFEKQYGDRQGIEDAIVGKRRFQYEDEVKKNPLNYDSWFDYIRLEESAGNKDRIR
EVYERAIANVPPAPEKRYWQRYIYLWINYALYEELDAGDMERTRDVYRECLKLIPHRKFS
FAKIWLLAAQFEIRQLNLKGARKILGTAIGQAPKDKIFKKYIEIELNLGNFDRCRKLYEK
YLEWSPENCYAWTKYAELEKSLCETERTRALFELAIAQPALDMPELLWKAYIDFELSEGE
FERTRELYERLLDRTKHLKVWISYAKFEASAIVEDGVDSDAAEDQAQDYPREQKEQCVQR
ARRVFEKALNYYRTSAPELKEERGMLLDEWLNMEASFGEVGDVSLVQSKLPKKLKKRRSI
ITEDGPAGYEEYIDYMFPEEAQTSNLKILEAAYMWKKRKVSSDDDED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggttccttcaaggacgcagacccaaccctagggttcttaacccgtaaggaaactgag
gtcaagctaccacgacccactagggttaagaacaaaaccccagcccctgttcaaatcacc
gcagagcaaatcctccgtgaggcacgtgaacgccaggaggctgaaatccgacctcccaag
cagaagatcactgatcccactgagctcgctgattaccgtctccggaagcgcaaggaattc
gaagacctaatccggcgtgtgaggtggaatgtcagtgtctggatcaagtatgcgcagtgg
gaggagtcccagaaggacttcaaacgtgctcgctctgtttgggagcgtgctcttgaggtt
gattaccggaaccacaccctgtggctcaagtatgccgaggtggagatgaagaacaagttc
atcaaccatgctaggaatgtgtgggaccgtgctgtcacgctcttgcctagagttgaccag
ctgtggtacaagtacattcacatggaagagattatagggaatgtggctggtgctcgacaa
atatacgagaggtggatgaattggatgccagaccagcaaggctggctctccttcatcaag
tttgagcttcggtataatgaagtggagcgtgctagagcgatttttgagcggttcgtacaa
tgtcatccgaaagttggtgcttggattcggtatgccaagtttgaaatgaagaatggtgag
gttgtgagggcgagaaatgtatatgagagagcagtggagatcctggctgaggatgaggag
gccgagcagttatttgtggcttttgcggaatttgaggagcggtgcaaagaaactgatcga
gcaaggtctatttataaatatgcacttgatcatatacccaaaggaagggccgaggattta
tataaaaagtttgtgggtttcgagaagcaatatggagatagacaaggcattgaggatgcg
attgtgggaaagaggagatttcagtatgaagatgaggttaagaagaatcctcttaattac
gattcctggtttgattatataaggctagaagagagtgctggaaataaggacagaattaga
gaggtttatgagcgagctattgctaatgttcctccggctccagagaagcggtattggcag
cgctacatttatttgtggatcaattatgcgctatatgaagagcttgatgctggggacatg
gaacgtacacgagatgtatatagggaatgccttaagctgattcctcataggaagttttca
tttgcaaaaatatggcttctcgctgcccagtttgagatacgacagctgaatctcaagggt
gcacgcaagatcctcggtactgcaataggccaagcacctaaagataagatatttaagaag
tatattgagatcgagctgaaccttgggaattttgatcgatgtcggaaattgtatgaaaag
tatctggaatggtctccagaaaattgctatgcatggaccaagtatgcagagttagagaaa
tcgttgtgcgagacagaacgaaccagggcgctttttgaacttgccattgcccaaccagca
cttgacatgcctgagttgttgtggaaggcatacattgactttgaactatcagagggtgaa
tttgagagaactagagaactttacgagagactcctagaccggacaaagcacctgaaggtg
tggatcagttatgcaaaatttgaggcgtctgctatagtggaagatggtgtggattcagat
gcggcagaagatcaggcccaggattatcctcgtgaacaaaaggagcaatgtgttcagcgt
gctcgaagggtttttgagaaagctctcaactattatagaacttcagctcctgagttgaag
gaggaaaggggcatgctgcttgatgaatggctaaatatggaggcttcctttggagaggta
ggtgatgttagcttagtccaatctaagctaccaaagaaactgaagaagaggaggtcaata
ataactgaagatgggcctgctgggtatgaggagtacatagactacatgttcccagaagaa
gcgcagacatcgaacctcaaaatattggaagcggcctacatgtggaagaagcggaaggtt
tcttctgatgacgatgaggactag
DBGET
integrated database retrieval system
