Prunus avium (sweet cherry): 110767045
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Entry
110767045 CDS
T05161
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110767045
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pavi01001
]
110767045
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110767045
03036 Chromosome and associated proteins [BR:
pavi03036
]
110767045
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
110767045
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110767045
Protein kinases [BR:
pavi01001
]
Serine/threonine kinases: Other
TAF1 family
110767045
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110767045
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
110767045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
110767045
NCBI-ProteinID:
XP_021826158
UniProt:
A0A6P5TFP5
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MGHDSDGGSQDGRDEDDEEEYEEAGRGSRFLGFMFGNVNDSGGLDADYLDEDAKEHLAAL
ADKLGPSITGIDLSVKSPQTSTDAVEEDYDEKAENAVNYFDIDEDFEGPEIQAATEEDHL
LPRKDYLSAQVSLSTLELTHSVFDDEDYDEEIEQEVEHEVVEKNVDVETISLPGDSKGEK
YSEDDYQIGGLDSENLDAHVEEFQEALSDKSATPLPVLCIEDGLVILRFSEIFGIHVPLK
KAEKREHRYSVPKDRYKSMDVSDIIEEDEEEFLKGSSHGLQSLKQADAMKYDISALNDTD
SENAKFGVLKATNSVALLDDGPIKDSCLNAEPLKEDLNFDISVGRQSPLCSKFYPLDQLD
WEEGIVWGNSPVASDNSDESCEISGPDEVSINSETEPDSGSQNVLLEPPKEPDERDHAVV
LHSSCSLLEPFGSRNSSELLCLPVSESRCHPQLLRLESRFEVDDHTDGTMESVGEKLHQS
DAVREFSKLTSQNRDMLKGSWLDQIIWDPDMPTGKPKLILDLQDEQMLFEILDNKESEHL
RLHSGAMIVTRPVNLSNGDSFELPGHGGQFGWRYVANDKHYSNRKTSQQLKSNSKRRTVQ
GIKIYHSQPALMLQTMKLRLSNKGVANFHRPKSLWYPHDNEVAVKERGKLPTQGPMKIII
KSLGGKGSKLHVDAEETVSSVKSKASKKLDFKPSETVKLFYLGKELEDDKSLAAQNVQPN
SLLHLVRTKIYLLPKAQKIPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSN
AGMGARLCTYYQKSAPDDQTGSLLRSDSNSLGHVISLNPADKSPFLGDTKAGCSQSSLET
NMYRAPVFSHKVPSTDYLLVRSAKGKLSIRRIDRLNVVGQQEPLMEVMSPGTKNLQTYMI
NRLLVYMCREFRAAEKRHVLPCIRADELPSQFPYLSEAFLRKKLKEHANLQRGSNGQWMW
VKKRNFRIFSEDELRNMVKPEEVCAYESMQAGLYRLKHLGITETHPSAISSAMSRLPDDA
ITLAAASHIERELQITPWNLSSNFVACTQGKENIERLEISGVGDPSGRGLGFSYVRAAPK
ASMSSAVVKKKSAATRGGSTVTGTDADLRRLSMEAAREVLLKFGVSDELIARQTRWHRIA
MIRKLSSEQAASGVKVDANTISKYARGQRMSFLQLQQQNREKCQEIWDRQVQSLSALDGE
ENESDSEGNNSDLDSFAGDLENLLDAEECEEVLGGDHESNHDKLDGVKGLKMRRRPSLAQ
AEEEIEDEAAEAAELCRLLMDDETERRKKKKTRVSGEELGLAPGSRTNYGFENADRAKKI
IGAAQPDESYTSKDNPVGDVKLVENPLKRKKTGTLKGMKKNDITHTGLMNKKLKISGDGG
KTYKEKKSAREKFMCGACHQAGHMRTNKNCPKYGEDQETHSDTPDLDKEDGKITALNPSN
QAQQKTTTKKLVPKSATKIAVVEASDVDVGLSTKVLPLKFKCGSTEKLPDKQALGETESS
ERPVASDPETGKPTFKVNKIIISNKMKPENAPVESQKPPIVIRPPTDTDKGHVESQKPTI
VIRPPANTDRDQVESQKPLIAKRPSMEAQREQHHKKIIIKRPKEIIDIDQVSQDGSTPVE
HRKTKRIVELTSSEKNRKEENMYLAKEAAKKKARDDKRSREEQEKRRNEERLREERARRL
YKEEMRMIEEQERLAEIRRYEAVIRQEREEEERQKAKKNKQKKKRPEIKEDYIEDSRARR
SDKRMQERDRGAKRRPVVELGRYGGESAPITKRRRGGEVGLANILERIIETLKDRIEVSY
LFLKPVSKKEAPDYLDIIERPMDLSTIREKVRKMEYKSREQFRHDVWQITYNAHKYNDGR
NPGIPPLADQLLELCDYMLVENDESLTEAEAGIESADF
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgattcagatggtggttcccaagatggaagggatgaagatgatgaggaagaa
tatgaggaggctggcaggggtagtcgatttcttggatttatgtttggcaatgtcaatgac
tctggtggtcttgatgctgattaccttgatgaggatgcaaaggaacacctcgctgcactt
gctgacaagctgggtccttctataacaggcatagatctgtcagtaaaatcaccacaaaca
tcaactgatgctgttgaagaagattatgatgagaaggctgaaaatgcagtgaattatttt
gatattgatgaggattttgagggacctgagattcaagctgctactgaggaggaccatttg
ttgcccagaaaggattatctttctgctcaagtgtcattgtctactttggagctcacacat
tctgtgtttgatgatgaagattacgatgaagaaattgaacaggaagtggaacatgaggtg
gttgaaaaaaacgttgatgttgaaactatctctttaccaggggattctaaaggagaaaaa
tattctgaggatgattatcaaattggcggtttggactctgaaaatttggatgctcatgta
gaagagtttcaggaagcgctttcagataaaagtgccacgccgctgccagttctgtgcata
gaagatgggttggtgatcttaagattctcggaaatctttggtattcatgtgcccttgaag
aaggcggagaaaagagaacatagatactctgttcctaaagataggtacaaatccatggat
gtttcggatatcattgaagaggatgaagaggaattcttaaaaggatctagtcacggattg
caatctttgaaacaggcagatgcaatgaaatatgacatctcagcactcaatgacactgac
tcggaaaatgcaaagtttggtgttctaaaagcgactaattcagtcgctctgctggatgat
gggccaataaaggactcctgtctcaatgcagaaccattgaaagaggatctaaattttgat
atttctgtgggaaggcagtcacctttgtgttcaaaattttatcctcttgatcaactagac
tgggaagaaggaattgtttggggcaattctcctgtagcaagtgacaattctgatgagagt
tgtgaaatttcgggacctgatgaagtttcaattaatagcgaaacagaacctgatagtggg
tcacaaaatgttctgttagagcccccaaaagaacctgatgagagggatcatgctgttgtg
ctgcatagctcatgtagtttattggagccttttggctcaagaaattcatcagaactttta
tgtcttcctgtctcggaaagcagatgccatccccaacttttaaggctagaatctcgattt
gaagtggatgaccatacagatggtacaatggagagtgtcggtgagaagcttcatcagagt
gatgctgtgagggaatttagcaaactcacttcacagaatagagacatgctaaaaggatcc
tggttagaccagataatttgggacccagatatgcctactggaaagccaaaacttatcctt
gatcttcaagatgagcaaatgctatttgagattttggataacaaggaaagcgaacatctt
aggcttcattcaggggccatgattgtgactcgcccggtaaacttgagcaatggggattct
tttgagctgccaggtcacggaggtcaatttggttggcgttatgttgctaatgataaacac
tattcaaataggaaaacttctcagcaactgaaatcaaattctaaaagacgcacagtgcag
ggcataaagatttatcactcacaacctgccctgatgttacagacaatgaaactgaggtta
agcaataagggtgtggctaattttcaccgaccaaaatctttatggtatccccatgacaat
gaagtggctgtaaaagaacgagggaagctccccactcaaggaccaatgaaaattatcata
aagagcttgggtgggaaaggaagtaaacttcatgtggatgctgaggaaacagtctcttct
gttaaatcaaaagcttcaaaaaagctagattttaagccatccgaaactgtgaagttgttt
tatttagggaaggaacttgaagatgataaatctcttgcagcccagaatgttcaaccaaat
tctttgcttcatcttgttcgtacaaaaatatacttgttgccaaaggcacaaaagattcct
ggtgagaataaatctttgcggcctcctggagcatttaagaagaaatctgacctttctgtg
aaagatggtcatgtgtttctaatggagtactgtgaggaaagacctttacttttgagcaat
gctggtatgggtgcaagattgtgcacttattatcaaaaatcagccccagatgatcaaact
ggttctttgttacgcagtgacagcaacagtttgggacatgtcatctcactaaatcctgct
gataaatcaccttttcttggagatacaaaagctggttgcagtcagtcatcgcttgaaaca
aacatgtatagagctcctgtattttctcataaggtgccatcaactgattatttgttggtt
cgttctgcaaagggaaagctttcaattagacgcattgacagacttaatgttgttggccaa
caggaacctctcatggaggtaatgtctcctggaactaagaatcttcaaacttatatgatt
aacaggctcttagtctacatgtgccgagagttccgtgctgccgaaaagcgccatgttctt
ccttgtatccgcgcagatgagctaccttcacaatttccttatctatctgaagcctttctt
cggaagaagctgaaggaacatgcaaatttgcagaggggatcaaatggacaatggatgtgg
gttaagaaacgcaacttccgaattttctcagaggatgaattaagaaatatggtgaagcca
gaagaggtgtgtgcctatgaaagtatgcaagctggtctttaccggctcaaacatttggga
attactgaaacacatccctctgccatatcatctgcaatgagtcgtctccctgatgacgca
attactctggctgctgcatcacacattgaaagggaactgcagattactccatggaacttg
agtagcaattttgtagcatgtacacagggaaaagaaaatattgagcgtttggaaatatct
ggtgttggggatccatctggccggggcctaggttttagttatgttcgtgctgcaccaaaa
gcatctatgtcaagtgcagtggtgaaaaaaaaatctgctgctactcgaggaggttccact
gttaccggaacagatgctgatctacgcagattaagcatggaggctgcacgagaggttctt
cttaaattcggtgtttctgatgaactgattgcgaggcagactagatggcatcggattgcg
atgatacgcaagctttcaagtgagcaagctgcatctggggtaaaagttgatgcaaacact
atcagtaaatatgcacgtggccagcgtatgtccttccttcagctacagcagcagaaccgg
gagaagtgtcaagaaatttgggataggcaagttcagagtctttcagctctagatggggaa
gaaaatgagagcgactctgaaggaaataatagcgatctggattcctttgctggggattta
gaaaatttgcttgatgcagaagaatgtgaagaagtgcttggaggtgatcatgaatccaat
catgataaattggatggtgttaaagggcttaaaatgagaaggcgcccttccttggctcag
gcagaagaggagattgaagatgaagcagcagaagcagcagagttatgcaggttgcttatg
gatgatgaaactgagaggaggaagaagaagaaaacaagagtttctggggaggagctgggg
ttggctcctgggtcaagaacaaattatggcttcgaaaatgcagatagggcaaagaaaata
attggtgcagcacaacctgatgaatcctatacttcaaaagataatccagttggagatgtg
aaactggtggaaaatcctcttaaaagaaaaaagaccggaacacttaaaggaatgaaaaag
aatgatatcacacatactggtctgatgaataagaaactgaagatatcaggagatggtggc
aagacatataaggagaagaaatcagcacgagagaaatttatgtgtggagcatgtcatcag
gctggacacatgagaacaaacaagaactgccccaagtatggcgaagatcaggaaacacac
agcgacactccggatctggataaagaagatggaaagatcactgctctgaatccatctaat
caggctcagcagaaaactacgacaaagaagctggtacctaaaagtgcaactaaaattgcc
gtggttgaagcttccgatgttgacgttggtctgagtacaaaggttcttccattgaaattc
aaatgtgggtcaactgaaaagcttcctgataaacaggctcttggagagacagagagctct
gaacgtccggtggcatctgatccggaaactgggaagcccacttttaaggtgaacaagata
ataatatcgaacaagatgaaacctgaaaatgcacctgttgaatctcagaagccacctatt
gtgatacggcctcccacagatacagataagggccatgtcgaatcacaaaagccaactatt
gttatacggccaccagcaaatacagatagagaccaggtggaatctcaaaagcccttaatt
gctaaacgaccatcaatggaggcacagagagagcaacatcataagaaaattataattaaa
cgtccaaaagaaattattgatatagatcaggtcagtcaggatgggagtactcctgttgaa
cataggaaaactaaaagaattgttgaattgacaagttctgaaaagaacaggaaggaagag
aacatgtatttggctaaggaagctgcaaaaaagaaagctagagatgataagagatcaagg
gaggagcaagagaaacggagaaatgaagagagattgagagaagagagggccaggaggctt
tacaaagaggaaatgaggatgatagaggagcaagaaagactagcagagattagaagatat
gaagcagtcatcagacaagagagggaggaagaagaacgccagaaagcaaagaagaacaaa
cagaagaagaaaaggcctgagataaaggaggattatatagaggattcacgagcaagaaga
tctgacaaaaggatgcaagaaagagatcggggtgcgaaaaggaggccagttgttgaattg
ggaaggtatggtggagaatctgccccgataacaaagcgtcgtagagggggagaggttggt
ctggcaaacatcttggagcgtattatagaaaccctcaaagatcgaattgaagtatcgtat
ctttttcttaaaccagtatccaaaaaggaagctcctgattacctggacatcatagagcgc
cccatggatctgtctacaatcagggagaaggtgaggaaaatggagtacaagagcagggag
caattcaggcacgatgtgtggcagataacttataatgctcacaaatataatgatgggcgt
aatccaggtatacctcctctcgcagatcagctcttagagctttgtgactatatgttggtt
gagaatgacgaaagcttgactgaagctgaagcaggcattgaatctgcagatttctag
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integrated database retrieval system
