Cutibacterium acnes TypeIA2 P.acn31: TIA2EST36_04560
Help
Entry
TIA2EST36_04560 CDS
T01655
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pax
Cutibacterium acnes TypeIA2 P.acn31
Pathway
pax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TIA2EST36_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pax03019
]
TIA2EST36_04560
03400 DNA repair and recombination proteins [BR:
pax03400
]
TIA2EST36_04560
Enzymes [BR:
pax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TIA2EST36_04560
Messenger RNA biogenesis [BR:
pax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TIA2EST36_04560
DNA repair and recombination proteins [BR:
pax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TIA2EST36_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEW83502
LinkDB
All DBs
Position
complement(978400..980550)
Genome browser
AA seq
716 aa
AA seq
DB search
MTTTTDAIPKVDDLRTQGVAILRRLVGRNNADFHPGQWEAIEALVAHHRRALVVQRTGWG
KSAVYFVATLLQRAIGSGPTLIVSPLIALMRDQVAAAKRAGVRAAAISSANATEWSEIAQ
RLDADELDVLLVSPERLVNPTFASRQLPELIKRMGMLVIDEAHCISDWGHDFRPDYRRIR
NLVSALPVTIPVLATTATANSRVVQDVAEQIAPSADDVFILRGPLARKSLRLGVLNLPNP
SERLGWLVQHLSELPKSGIIYCLTVSTAEDTARALTTAGHNVRAYTGRTDAEARTELEKA
LRNNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDNADILLLPG
PEDPDIWTYFATSSMPTQERADAVLRALAGGQALSISALETRVDIRRSQLELLLKVMAVD
GSVVKVRDGWQATGKPWVHDTERYERISQARREEQQAMLGYERSRTCRMTLLTGQLDDPS
TTPCGRCDVCAGPWYSVEVDQSAAVRAVQSLNRVGVPVEPRTAWPVGMDALQVALKGRIS
AEEIAAEGRVIARLSDLGWGGALRDLLRSDTNGVPIDAEITPALAKACLRVLAEWDWEQR
PAAIVRIPSITRPHLIDSLASGIARVGHLQDLGWLDLADGSARLQSSTNSAYRLRDVHDR
FSVGPGLMSRLSHLGGASVLLIDDVISSRWTMTVAARSLRRAGSGPVLPLALALTA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaactaccgacgcaataccgaaagtagatgacctacgcacccaaggggtggca
atccttcgtcgtctcgtcggtcgcaacaatgccgatttccaccctggacagtgggaggcc
atagaggctctggttgcccaccaccgtcgagcgctcgtagtccagcgcaccggttgggga
aagtcagcggtttactttgtcgctaccttgttacagcgtgccatcggctcaggcccgacc
ctcatcgtctctccacttatcgccctcatgcgcgaccaggtcgctgccgcaaagcgagct
ggcgtgcgcgcagcggccatctcatcggccaatgccaccgagtggtccgaaatcgcccaa
cgcctcgacgccgacgaactcgacgttctattagtctcccccgaacgcctggtcaatccc
acattcgccagtaggcagctgcccgagctcataaagcgaatgggcatgttggtcatcgac
gaagcccactgcatctctgactgggggcacgattttcgccccgattaccgacgcatccgt
aacctcgtctctgccctaccggttacgatcccagtacttgcgacaacggcgaccgcaaac
tcacgtgtggtccaagatgtggccgagcagattgcccccagcgccgatgatgtgttcatc
cttcgtgggccgttagcccggaaatctctgcgactcggcgtactcaatctgcccaaccct
tccgaacggctcggttggctcgtccagcacctcagtgaacttcccaagtcgggaattatc
tactgcctgactgtttcgacggccgaggacaccgcgcgtgctctaaccacggccggtcac
aatgtgcgggcttacaccggacgcaccgatgccgaagcaaggaccgaactcgagaaagcc
ctgcgcaataaccaggtcaaggccttagtggcgaccagtgccctgggcatgggtttcgac
aaaccggacctcggtttcgtcgtgcacttgggtgcgccgagctctccgatcgcgtactac
cagcaggtaggccgtgccggtcgcgccaccgacaatgccgatatcctgttgcttccgggc
ccggaggatcctgacatttggacttacttcgctacctcctctatgcccacccaagaacga
gccgatgccgtgctcagagcactcgcaggtggtcaggcgctctctatctcagctctggag
acgcgggtcgacatcaggcgtagccagttagagctattgcttaaagtgatggccgttgat
ggctcggtcgtgaaggtccgagatgggtggcaagccaccggcaagccgtgggtgcacgac
accgaacggtacgaacgcatctcccaggcacgtcgcgaggaacagcaggccatgctcggc
tacgagcgctcaagaacctgtcgcatgaccttgctcaccgggcagctggacgacccctcc
acgactccttgcggacgctgcgacgtctgtgctggcccgtggtactcagtcgaggtcgat
cagtcagccgctgtgagagccgtccaatccctcaaccgggtgggagttccggtggaacca
cgcaccgcctggcccgtggggatggatgccctccaggttgcgctcaagggtcgcatcagt
gccgaggagatcgctgcagagggccgcgtcatcgcgagactctccgatctgggttgggga
ggggcgctgcgcgacctacttcgctccgacaccaatggtgtccctatcgacgctgagatc
accccggcgttggccaaggcgtgcttgcgagtgttggccgagtgggactgggagcagcgt
ccagccgcgatagtacggatcccgtcgatcactcgcccacacctcattgattccctggcc
tcgggaattgcacgggttggccacctgcaagaccttgggtggttggacctggcggatggg
tccgcacgactacagtcatccacgaactcggcttaccggctccgtgatgtccatgatcgg
ttcagcgtcggaccggggctgatgtctcggttatcccatcttggcggggcatcggttctg
cttatcgatgacgtcatctctagccgctggacgatgacggtcgctgcacggtcgttgaga
cgagccggatccgggcccgttcttccactagccctcgccctcacagcctga
DBGET
integrated database retrieval system
