Pseudomonas azotoformans: AYR47_27610
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Entry
AYR47_27610 CDS
T04879
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYR47_27610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_27610
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR47_27610
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AYR47_27610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
HAMP
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AMN81840
UniProt:
A0A127I5K6
LinkDB
All DBs
Position
complement(6015706..6017721)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgtcacccgctttgaacccgccggcgatcaaccggaagccatt
cgccagatggtcgaaggcatcgaagccgggctggcgcaccagaccctgctcggggtgacc
gggtcgggcaagaccttcagcatcgccaacgtcattgcgcagatcaaccgacccaccctg
gtgctggcgccgaacaagaccctggccgctcagctatacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtacttcgtttcctactacgactactaccagcccgaagcctac
gtgccgtcctccgatacctttatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcggctgtcggcgaccaaggccttgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcagcccggaaacctatctgaagatggtgctgcacgtc
gatcgcggcgacaagctcgatcaacgcgagctgttgcgccgcctgaccagcctgcaatac
acccgcaacgacatggactttgcccgtgccaccttccgcgtgcgcggcgatgtgatcgac
atctacccggcggaatccgacctggaagcgatccgcatcgagctgttcgacgatgaagtc
gagagcctgtcggcctttgacccgttgaccggcgaggtgatccgcaagctgccgcgcttc
accttctatccgaaaagccactacgtgaccccgcgtgaaaccctgatgggcgccattgag
ggcatcaaagtcgagttggccgaacgcctggagtacctgcgttccaataacaagctggtg
gaagcccagcgcctggagcagcgcacccgtttcgacctggagatgatcctggagctgggc
tactgcaacggcatcgaaaactactcgcgctacctgtcgggccgcgaatccggcgcgccg
ccgccgacgctttacgattacctgccgcctgacgcgctgctggtgatcgacgagtcccac
gtcagcgtgccgcaagtgggggcgatgtataagggcgaccgttcgcgtaaagaaaccctg
gtggagtacggtttccgcttgccgtcggccctggataaccggccgatgcgctttgatgag
tgggaggccatcagcccgcagactatctttgtgtccgccacgccgggcaactatgaggcc
gagcatgccggccgcgtgatcgagcaactggtgcggccgactggtttggtcgacccggaa
atcgaaatccgcccggcgctgacccaggtcgacgacttgctctcggaaatcaccaagcgc
gtggccctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacttg
accgactacctggccgaccacggcgtgcgcgtgcgctacctgcactcggacatcgacact
gtggaacgcgtggagatcatccgcgatctgcgcctgggcacctttgatgtgctggtgggc
atcaacctgctgcgtgaaggcctggacatgccggaagtgtcgctggtggcgatcctcgat
gcggacaaagagggctttttgcgctctgaacgctcgttgatccagaccatcgggcgtgcg
gcacggaacctcaatggccgggcgattctctacgcggaccgcattaccggttccatggaa
cgggcgattggtgagacccagcgccgtcgcgacaagcagattgcgttcaacctggaaaat
ggcatcacgcccaagggcgtgttcaaggacgttgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaaaggcatggccaaggcagccgaggaaagcgccaag
tacgagaacgaattgcgctcgccgagtgagatcaccaagcgcatccgccagttggaagag
aagatgtaccaattggcgcgggacctggagttcgaggcggcagcgcagacgcgggacgag
atcggcaagttgcgggagcgcctgctggcggtgtga
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integrated database retrieval system
