Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4142
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Entry
PSEBR_a4142 CDS
T01472
Name
(GenBank) Succinate dehydrogenase (Succinate dehydrogenase flavoprotein subunit)
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00020
Citrate cycle (TCA cycle)
pba00190
Oxidative phosphorylation
pba00650
Butanoate metabolism
pba00720
Other carbon fixation pathways
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01120
Microbial metabolism in diverse environments
pba01200
Carbon metabolism
Module
pba_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pba_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pba_M00149
Succinate dehydrogenase, prokaryotes
pba_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSEBR_a4142
00650 Butanoate metabolism
PSEBR_a4142
09102 Energy metabolism
00190 Oxidative phosphorylation
PSEBR_a4142
00720 Other carbon fixation pathways
PSEBR_a4142
Enzymes [BR:
pba01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSEBR_a4142
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEA70547
UniProt:
F2KBX0
LinkDB
All DBs
Position
complement(5059382..5061154)
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGMPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGVDAIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGIEYDDATDANIEAALARLSALNERTEGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLAQLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcatcattggtggtggcggtgccggc
atgcgcgcagcgctgcaactggcacagggcggtcacaagactgccgtgatcaccaaggtt
ttcccgacccgttcgcacactgtttccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgagtacatgtgtcaggaaggcccggctgcggtgttcgag
ctggaccacatgggcatgccattctcgcgtaccgagcaaggtcgtatctaccagcgtccg
ttcggtggccagtccaaggactacggcaagggcggccaggctgcacgtacttgcgcggcg
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggt
accacgttcctgaacgagtactacgccgttgacctggtgaaaaaccaggacggcgccttc
gtcggcgtgatcgcgatctgcatcgaaaccggcgaaaccacctacatccgcgccaaggcc
accgtactggcgaccggcggtgcaggccgtatctacgcatccaccaccaatgccctgatc
aacaccggtgacggtgtcggcatggccctgcgtgctggcgtgccggtacaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtgaccgaaggttgc
cgtggtgaaggtggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgccaaggaccttgccggtcgtgacgtggttgcccgttcgatggttaaagaaatc
atcgctggcaacggttgcggtccgaatggcgaccacgtgatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgcctgccaggcatctgcgaactgtccaagaccttcgct
cacgtcgacccggtcgttgcgccagttccagtggttccaacctgccactatatgatgggc
ggcgttgccaccaacattcatggccaggcgatcacccagaacgccgaaggcgtggacgca
atcatccctggcctgttcgcagtgggtgaagtggcttgcgtatcggtccacggtgccaac
cgtctgggcggcaactcgttgctcgacctggtggtcttcggtcgcgctgccggcctgcac
ctggaaaaagcgctgtccgacggtatcgaatatgacgatgccaccgacgccaacatcgaa
gctgccctggcgcgtctgtccgctctgaacgagcgtaccgaaggcgaagacgtggcgacc
ctgcgtcgtgagttgcaaaactgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaaggggattgcccagctggcgcaattgcgtgaacgaatcgccaacgtgaag
atcaacgataagtcgcaggcgttcaacactgcccgtatcgaagcgctggaattgcagaac
ctgctggaagtggccgaagccaccgccatcgccgcagaagtgcgtaaagagtcccgtggc
gcccacgcccgcgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccttg
tacttcccgggtgaaaaacgcgtcgccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaaccaaaagtccggacttattaa
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