Pseudomonas bambusae: AAEO81_06895
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Entry
AAEO81_06895 CDS
T11347
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbab Pseudomonas bambusae
Pathway
pbab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAEO81_06895 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbab03400
]
AAEO81_06895 (ung)
Enzymes [BR:
pbab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AAEO81_06895 (ung)
DNA repair and recombination proteins [BR:
pbab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AAEO81_06895 (ung)
Prokaryotic type
AAEO81_06895 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WZO62961
LinkDB
All DBs
Position
1530006..1530701
Genome browser
AA seq
231 aa
AA seq
DB search
MTDDDRIKLEPSWKQALREEFEKPYMGELREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
TVKVVILGQDPYHGPNQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTLTVERANAASHAGKGWQHFTDKIIETVSAHQPHLVFLLWGSHAQSKKKLI
DASKHLILTSVHPSPLSAYKGFLGCGHFGMANKYLQQNGLTPIEWRLPAVV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaagctggagcccagttggaaacaggctctgcgcgaagaa
ttcgaaaagccctacatgggcgaactgcgcgagtttctgcgccaggagcacgcggcaggt
aaagagatttatccgccaggcccgctgatcttcaatgccctgaattcgacgccgctggac
accgtgaaagtggtcatcctcggtcaagacccttaccacgggccgaatcaggcccacggt
ttgtgcttctcggtgcaaccgggagtgcctgcgccgccgtcgctggtcaacatctataaa
gagctgaaacgtgacctgaacatcgacattcccaaccatggctacttgcagtcgtgggcc
gatcaaggcgtgctgatgctcaataccaccttgaccgtcgaacgggccaacgcagcatca
cacgcgggtaaaggctggcagcacttcactgacaagatcatcgaaaccgtcagcgcccat
cagccgcatctggtgttcctgctgtgggggtctcacgcacagagcaagaagaagctgatc
gacgcgtcgaagcacctgatcctgacctccgtccacccgtcgccgctgtcggcctacaaa
ggcttcctcggttgcgggcatttcggcatggccaacaagtacctgcagcagaatggcctc
acacccattgaatggcgattacccgcggttgtgtaa
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