Roseinatronobacter sp. S2: P8S53_03575
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Entry
P8S53_03575 CDS
T09279
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pbae
Roseinatronobacter sp. S2
Pathway
pbae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8S53_03575 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbae03021
]
P8S53_03575 (rpoB)
03400 DNA repair and recombination proteins [BR:
pbae03400
]
P8S53_03575 (rpoB)
Enzymes [BR:
pbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8S53_03575 (rpoB)
Transcription machinery [BR:
pbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8S53_03575 (rpoB)
DNA repair and recombination proteins [BR:
pbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8S53_03575 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
KorB
Motif
Other DBs
NCBI-ProteinID:
WFE75500
LinkDB
All DBs
Position
768733..772869
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQSYVGQKRIRRMFGKIREVLEMPNLIEIQKNSYDLFLRSGDADRPLDGEGIMGVFQSV
FPIKDFNETATLEFVKYELEKPKYDTDECIQRDMTYAAPLKVTLRLIVFDIDEDTGAKSV
KDIKEQDVFMGDMPLMTGNGTFIVNGTERVVVSQMHRSPGVFFDHDQGKTHSSGKLLFTC
RIIPYRGSWLDFEFDAKDMVFARIDRRRKLPVTTLLYALGMDQNQIMNAYYDRVSFSLQK
NKGWVTKFFPERVRGTRPTIDLVDAATGEVICKAGDKMTPRMVKQLIDEGKVTDLLVPFD
HIVGRYVAQDLINEETGEIYAEAGEELTWDLDKDGEVKGGTLKVLLDNGITDIEVLDIDG
VNVGPYIRNTMAADKNWSRENALMDIYRVMRPGEPPTVDTASALFDQLFFDSERYDLSAV
GRVKMNMRLQLDAPDTLRTLRPEDVVACIRGLVELRDGKGEIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIRERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFAR
VNKYGFIETPYRKVVDGQVTDEVVYLSATEEQRHTVAQANATLDENGAFVNELVSTRKAG
EFMLNPREAVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMMRQAVPLLQSDAPLV
GTGMEGIVARDSGAAILTRRAGVIDQVDAQRIVVRATEMLEAGEPGVDIYRLRKFKRSNA
SSCINQRPLVKVGDHVSRGEVIADGPCTDMGELAVGRNIVVAFMPWNGYNFEDSILISER
ILKDDVFTSIHIDEYEVAARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYVGAEVQAGD
ILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHGVEK
DERALQIEREEIERLSRDRDDELEILERNIYGRLKQLIFGKVAVKGPKGVKSNSEITDEL
LESLSRGQWWQLALSDEAEAQEVEALNALYDQQKRQLQARFDDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQAGDKMAGRHGNKGVISKVVPVEDMPFLADGTTVDMVLNPLGVPSRMN
VGQILETHMGWALRGLGVQIDEALQEYRRSGDMTPVREAMRIGYGDDFYAEVFDGMDETA
LVESATTVTKGVPIGTPVFDGAKEPDVDDALRRAGFDTSGQSVVFDGRTGEQFARSVTVG
VKYMLKLHHLVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNYEAGVPESFNVLVKEVRGLGLNMELLDSEEEG
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcctatgttggccagaaacgtatccgcaggatgttcggcaagatccgtgaa
gttctggaaatgccgaatctgatcgagattcagaaaaattcgtatgatttgttccttcgc
tccggcgatgcggaccgcccgcttgacggcgaaggcatcatgggggtgttccagtcggtt
ttcccgatcaaggatttcaacgaaacggcaacgctggagttcgtgaaatacgaactggaa
aaaccgaaatacgacaccgacgaatgcatccagcgcgacatgacatatgcggcaccgttg
aaagttacgctgcggctgatcgtatttgatattgatgaagacaccggcgcgaaatccgtt
aaggatatcaaggaacaagacgtgttcatgggcgacatgccgcttatgaccggaaacggg
acgttcattgtcaacggcaccgaacgggtggtggtcagccagatgcaccgcagccccggc
gtgttctttgaccatgatcaggggaaaacgcacagctcgggcaagctgctgtttacctgc
cggatcattccgtatcgcgggtcatggcttgattttgaatttgacgccaaggatatggtt
tttgcgcggatcgaccgccgccgcaaactgcctgtgaccacgcttctgtatgcgttgggc
atggatcagaaccagatcatgaacgcgtattatgaccgcgtcagcttcagcctgcaaaag
aacaagggttgggtcacaaaattcttccccgagcgtgtgcgcggcacccgcccgacaatc
gatctggtcgacgctgcaaccggcgaagtcatctgcaaggctggcgacaagatgaccccg
cgcatggtcaagcagctgatcgacgaaggcaaagtcactgacctgctggttccgtttgac
catatcgttggccgctatgttgcccaggacctgatcaacgaagaaaccggcgaaatctat
gccgaagccggcgaagaactgacctgggatctggacaaggatggcgaagtcaagggcggc
acgctgaaagtgctgctggacaacggcatcacggatatcgaggttctggacatcgacggt
gtcaatgtcggcccctatatccgcaacaccatggctgcggacaaaaactggagccgcgaa
aacgcgctgatggacatttaccgtgtcatgcgccccggcgagccgccgaccgttgacaca
gcatcggcgctgtttgaccagttgttcttcgattccgaacgctatgacctgtccgccgtt
ggccgtgtgaagatgaacatgcgccttcagcttgatgcaccagacacactacgcacgctg
cgccccgaagatgtggtggcgtgtattcgcggtctggtcgaattgcgtgatggcaagggc
gagattgacgacattgaccaccttggcaaccgtcgcgtgcggtccgtgggcgagttgatg
gaaaaccagtatcgcgttggcctgctgcgcatggagcgtgcgatccgcgagcgcatgtcc
tcggtcgagattgacactgtcatgccgcaggatctgatcaacgcgaaaccggctgcggcc
gcagtgcgtgaattcttcggctccagccagttgtcccagttcatggaccagacaaacccg
ctgtccgaagtgacacacaaacgccgcctgtccgcgcttgggccaggtggtctgacgcgc
gaacgcgcgggtttcgaggtgcgcgacgttcaccccacccattatggccgcatgtgcccg
attgaaacgcccgaaggtcagaatatcggtctgatcaactctctggcgacattcgcgcgc
gtcaacaaatacggcttcatcgaaacaccctatcgcaaggttgtggacgggcaggtcacg
gatgaagtggtctatctgtcagccaccgaagagcaacgccacacggttgcgcaggccaac
gcgacgcttgatgaaaatggcgccttcgtcaacgaactggtgtccacgcgcaaagctggc
gagttcatgctgaacccgcgcgaagccgttgacctgattgacgtgtcgcccaagcagctg
gtttcggttgcggcatccctgatcccgttccttgaaaacgacgacgccaaccgcgcgttg
atggggtcgaacatgatgcggcaggctgtgccgttgctgcaatcagacgcgccattggtc
ggcacaggcatggagggcattgttgcccgcgattccggtgcggccatcctgacgcgtcgt
gctggtgttatcgaccaggtcgacgcgcagcgtattgttgtgcgtgcgaccgaaatgctg
gaagcgggcgagccgggcgtggatatctaccgtctgcgcaagttcaaacgctcgaacgcg
tcatcatgcatcaaccagcgccccttggtgaaggtgggtgatcatgtatcgcgtggcgaa
gttattgctgatggtccgtgcaccgacatgggtgaactggccgtcgggcgtaacatcgtc
gtggcgttcatgccgtggaatggctacaacttcgaggactcgatcctgatttcagagcgt
attctgaaagatgacgtgttcacctcgattcatatcgatgaatacgaagttgcggcccgc
gacaccaagcttggcccggaagatatcacccgcgatattcccaacgtgggtgaagaagca
ctgcgcaatctggatgaggcaggcatcgtctatgtcggcgccgaagttcaggccggtgac
attctggtaggcaaggtcacgccaaaaggcgaaagcccgatgacgccggaagaaaagctg
ttgcgcgcgatctttggtgaaaaggcgtccgatgtgcgcgacacatcgctgcgtctgcca
ccgggggcttacgggacgatcgttgaagtgcgcgtgttcaaccgccatggtgtggaaaaa
gatgaacgcgccctacagatcgaacgcgaagaaatcgaacgcctgtcacgcgaccgcgat
gacgagctggagattctggagcgcaacatctacggtcgtctgaagcagctgatcttcggc
aaagtggctgtcaaaggccccaaaggtgtcaaatccaattccgagattaccgacgaattg
cttgaaagcctgagccgtggtcagtggtggcagcttgccttgtccgacgaggccgaggca
caggaagtagaggcgctgaatgccctttacgaccagcaaaagcgccagttgcaggcccgt
ttcgacgataaggtcgaaaaagtccgtcgtggcgatgatctgccaccgggcgtgatgaaa
atggtcaaggtgttcgtcgccgtgaagcgcaagcttcaggcaggggacaaaatggccggt
cgtcacggcaacaaaggcgtcatctccaaggtcgtaccggtcgaggatatgccgtttctg
gcagacgggaccacggttgacatggtgctgaacccgctgggcgtgccatcgcggatgaat
gtcggccagattctggaaacccatatgggctgggccttgcgcggtctgggcgttcagatc
gacgaggcattgcaggaataccgccggtcaggtgacatgacgcctgtgcgtgaagctatg
cgcattggctatggtgatgacttctatgccgaagtgttcgatggcatggatgaaaccgcc
cttgtcgagtctgcaacgaccgtcacaaagggggtgccgattggcacgccggtattcgat
ggtgccaaggaacctgatgtcgatgatgcgctgcggcgcgccggttttgacacatctggc
cagtcggtcgtctttgacgggcgcacgggcgaacagtttgcccgttcggtgactgtgggt
gtgaaatacatgctgaaactgcaccaccttgttgacgacaagctgcacgcgcgttcaacc
gggccttacagccttgtcacgcagcagccgctgggtggtaaagcgcagttcggtggtcag
cgtctgggcgagatggaggtctgggcactggaagcttacggtgcggcctatacgcttcag
gaaatgctgactgtcaaatcggacgacgtggcaggccggaccaaggtgtatgaatcgatc
gtcaagggcgaggacaactatgaagcgggcgtgccggaatcgtttaacgttctggtgaaa
gaagtccgtggcctcggcctgaatatggaactcctggattcggaggaggaggggtaa
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