Pogonomyrmex barbatus (red harvester ant): 105422471
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Entry
105422471 CDS
T04903
Name
(RefSeq) transient receptor potential-gamma protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105422471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbar04040
]
105422471
Ion channels [BR:
pbar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105422471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_3
Ank
Ank_4
Ank_5
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
105422471
NCBI-ProteinID:
XP_011630142
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MTGTYRRSVSTESAYEDEEQFARGSATPGEDIAGEEDNGSNGGGTNNFPLRMASDTTRGR
ITSVAGGFLRGSAGQHVNFDPEAPPPPPTHIVQTTCLLERPEVDKKVKSERTCIIDARWR
RPSRMRGENSRYRQCLVRHKDTRLHVQTQRTWRQPNAGTVETQNTDGRMLQKAQEADINI
NCVDPLGRSALLMAIDNENLEMVELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEESLH
RNGEPHSWEALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGSTLPMPHDVRCGCDEC
VTSRMEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEY
QELRRQCQDFATALLDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFV
AHPNVQQLLASIWYEGLPGFRRKNMFLQALEIVRIGVLFPFFSVAYIIAPHSMVGQTMRK
PFIKFICHSASYFTFLFMLILASQRIESVIGNWMGHDVVEHEPAPTKRGAAPTIVEWFIL
AWVSGLIWSEVKQLWDVGLEEYVNDMWNVIDFVTNSLYVATVALRVVAYYRVQKENEDLA
PGTVELQREQWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIM
KFFFLYVLVLFAFSCGLNQLLWYYADMEKKRCHTAYPNANITTDSNACIVWRRFANLFET
IQTLFWAVFGLVDLESFELDGIKVFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLI
SERADVEWKFARSKLWISYFEEGGTVPPPFNIIPTPKSAWYVAQWLYRKLCGHSRAAKKE
HMRTIRRKVKQASERDFRYQSIMRNLVRRYVTVEQRKAEGEGVTEDDVNEIKQDISAFRC
ELIEILKNSGMNTSTAASSGTGAGGKKNRQKERRLMKGFNIGPQPGGSGTLPPVAEFIAS
LQQAQQENSHPDLFGSTLSGIFGPGTTPKKSPHHISTNSVPGLATAPRQNRGTRSSSRKK
RWGTLIEAAKSGRVSRLIGRSRSEDSVYSPASEDGGTRSEGSSDSKSSLEGASHDIQSTQ
HPHHSHSHHAHHHEAHHMFAHGLGPALAALRKKRKKFSASRLSTPAMTSSTNTNPADSSA
TSSVATVLACRVYSKKQLQRASSVPTRGPELTPQSSITLSRRHEVTQSQQPSLDVVEIAI
SERINAQQGVVVPLTPSTTEESVVASGSTSITAKRNGSATQLQRLPGIEPISGHDVSAGW
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaacataccggagatcggtgagtacagaaagcgcgtacgaagatgaggagcag
ttcgccaggggcagcgcaacccctggtgaagacatcgccggtgaagaggataacggttca
aatggaggtggcacgaacaactttcctttgagaatggcatccgacacaacgaggggtcga
atcacctccgtcgccggcggtttcctacgaggctccgccggacagcatgtgaacttcgac
cccgaggcacctccaccgccgccgacgcatatcgtacagacaacctgtctgctcgaacga
ccggaagttgacaagaaagtcaagagcgagcgcacatgtatcattgacgcgaggtggcgt
aggccatcacgaatgcgaggcgagaatagtagatacagacagtgtttagtcagacacaaa
gacacaaggctgcacgtgcagacacagcgcacatggagacagccgaatgcggggacagta
gaaacacagaatacagacggtagaatgctccaaaaagcccaggaggccgacattaacatt
aactgcgtggatcctctcggacgatcggcccttctcatggcgatcgataatgaaaatcta
gagatggtggagcttttaatagagcacaaggtcgatactaaggatgcactccttcacgct
atctccgaggaattcgttgaggcggtggaggtccttctagagcatgaggagagtcttcat
agaaatggcgagccgcatagctgggaggctttgcctcctgatacagccacgttcacgccc
gacatcacgccgttgatcctgtcggcccacagggacaactacgaaattataaagattctc
ctggatcgtggatccactctgccgatgccacacgacgttcgctgtggatgcgacgagtgc
gtgacatcgaggatggaggattccttgagacattcgagaagccgaataaacgcctatcgg
gcgttggcgtcaccgtccttgatagcactgtcgtctaaggatcccatcctgactgctttc
gagctctcctgggaacttcgacgactttcgttcttggagcacgaattcaagtgcgaatat
caggagcttcgaagacagtgccaagatttcgcgactgctttgctggaccacactagaagt
tcctatgagctcgaagtcctgctgaatcacgatcccacgggaccagcttttgagcatgga
gagaggatgcatctcaaccgtttaaaattagccattaagctgagacagaagaagttcgtg
gcgcatcctaacgtgcagcagctactggcatcgatctggtacgagggtctgccggggttc
cgaaggaagaatatgttcctccaggcgctggagatcgtcaggatcggcgtccttttcccc
ttcttcagcgtagcgtacatcatcgcgccgcacagcatggtcggccaaaccatgaggaag
ccgttcatcaagttcatctgtcattccgcgtcgtatttcacttttctattcatgttaatt
ctggctagtcaacggatagagagcgtgatcggtaattggatggggcacgatgtcgtggag
cacgaaccagcgccgacaaaaaggggtgccgcgccaacgatcgtggaatggttcatatta
gcctgggtgtcggggttgatttggtcggaggtgaaacaattgtgggacgtgggcctggag
gagtacgtgaacgatatgtggaacgtgatcgacttcgtaacgaactcgctatacgtagcc
acggtggcgctcagggttgtagcttactacagggtgcaaaaggagaacgaggacctggca
ccgggaacggtcgagcttcagcgtgagcagtgggacacttgggatccgatgctcatctcc
gagggcctcttctcggccgcgaacatcttcagttcgctaaagctcgtctacatattctcc
gtgaatcctcatctcggtcctctgcaagtttctctgtcgaggatggtcatggacattatg
aaattcttcttcctctacgtgctggttctcttcgctttctcgtgcggtctcaatcaactt
ctctggtattacgccgacatggagaagaaacgatgtcacacagcgtatcctaatgctaac
atcactaccgattccaacgcgtgcatcgtttggcgtcgattcgcaaatttgtttgagaca
atacaaacactcttttgggcggtcttcggtttggtggacctcgagagcttcgaattagat
ggcatcaaggtgtttaccagattctggggtatgttgatgttcggcacgtattcggttatt
aacatcgtcgtcctcctgaatcttctgatcgccatgatgaatcattcctatcaactaatc
tcggaacgcgccgacgtcgagtggaagttcgcgaggagcaaactttggatcagctatttc
gaggagggtggtaccgtcccgccgccgtttaacatcataccgaccccgaagagcgcctgg
tacgtcgcacagtggctgtatcggaagctctgtggacacagcagggcggctaagaaggaa
cacatgcgaacaatcaggcgaaaggtcaagcaagcttccgagcgggactttaggtatcag
agcatcatgagaaatttggtaagacgctacgtcaccgtcgagcaacgcaaggcggaaggc
gagggcgtcacggaggacgacgtgaacgagatcaaacaggacatcagtgcgtttcgttgc
gagctcattgaaatattgaagaactccggcatgaacacttccaccgcggcgagcagcggt
accggtgcgggtggcaagaagaatcgccagaaagagcggcgtttgatgaagggattcaac
atcgggccgcaaccaggcggaagcggcaccctgccccctgtggccgagttcatcgcgtct
cttcaacaagcacagcaggagaactcccatcctgacttattcggctcgactctgagcggc
atattcgggccgggcacgactccgaagaagagcccacatcacatcagcactaatagtgtg
cctggtctggccaccgcgcctcgacaaaaccgcggcacgagaagtagctctcgaaagaaa
cgctggggtactctgatcgaggccgcgaaatctggaagagtttccagactgatcggtaga
tctcgttcggaggactcggtgtactcgccggcgtccgaggacggcgggacgcggtccgag
ggctcctcggattcgaagtcctccttggagggtgccagtcacgatatacaaagcacgcaa
catccccatcactctcactctcatcacgcgcaccatcacgaggcgcatcacatgtttgcc
cacggtctgggcccggctctggccgccctgaggaagaagcgcaaaaagttctccgcctcg
aggttgtccacccccgcgatgaccagcagcaccaatacgaatcccgcggactcgagcgcg
acgtcctcggtcgccaccgtcttggcatgcagggtttactcgaaaaagcagctgcaacgc
gccagcagcgtgcccacccggggccccgaattaacgccacaatcgtcaataacgttgtca
cgacggcacgaggtcacgcagagccagcagcctagcctcgacgtcgtcgagatcgccatc
agcgagcgtatcaacgcgcagcaaggtgtcgtcgttccgctgacgccgtcgaccaccgag
gagagcgtcgtggcgagcggctcgacgtcgatcacggcgaagcgaaacggatcggcgacg
cagctgcaacgtcttcccggtatcgagccgatttccggccacgacgtgtccgccggctgg
ctctga
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