Pogonomyrmex barbatus (red harvester ant): 105423018
Help
Entry
105423018 CDS
T04903
Name
(RefSeq) transient receptor potential protein-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
105423018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbar04040
]
105423018
Ion channels [BR:
pbar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105423018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank
Ank_2
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
105423018
NCBI-ProteinID:
XP_011630949
UniProt:
A0A6I9WGW5
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MLLVYTWEIANASSNFTSDITPLILAAHKNNYEILKLLLDRALALALAFYCRCGCDECVT
SSEQDSLRHSQSRINSYRALTSSSLIALSSRDPLLTAFELSWELRRLSRMEQEFRAQYNE
MREQTQQFATALLDHARTSYELEVMLNYNPTGENWDPGERQTLDRLKLAIKYKQKQFVSH
PNVQQLLAAIWYDGLPGFRRKSMMAQLMEVAKLGAMFPVYSAIYMIAPTSQMGLFMKKPF
VKFICHSASYAFFLMLLGMASQRVEYLLIELFGNEWMREILAGWKKRERGCIPGFVETGV
IIYVISLIISEIKSLWADGLIEYISDLWNIVDFIQNTFYVIWISMRVTAWWIVQREYWNG
LDPWYPRDQWHAFDPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLGRMIIDIIK
FFFIYTLVLFAFGCGMNQLMWYYADLEKKKCYHASEELPDFDNQEKACSIWRRFANLFET
SQSLFWASFGMVDLMSFDLTGIKSFTRFWALLMFGSYSVINVIVLLNMLIAMMSNSYQII
SERSDTEWKFARSHLWMSYFEDGDTVPPPFNMIPTNKTFQKLCKCGGVGRSTTSFIKKSR
EKALIRHDTVMRLLIRRYVTAEQRKRDEFGITEDDVREIRQDISSFRYDLIDILRKNGMC
TPALDKEETNIPGKKGRVMERRLQKDFQIGIVEGIVQAVIQSEKEPKDVFSQIAKAIGRK
GSSSGKRDWNAVVRQSTITMDPIGSTNEAMQRQTRRSLRRHLAYQPNSDLASMDPKRLVD
YNPNLSDFTPATRIAYAKFMLSKNKLDEQSEGINNSSTTTEAAPRRSSKVMIAKTSDIPR
PAIETFKKDLLKSTSSNSMDKALEKVLDIKASEVRSTSPIPEDPLGEEVNKQSTSSAISD
QEKKIEMKENAQEQQKEKETSEDKTLEEQRQEEKVKNEKECQQSENIKKNNSDYIEEKTP
EINKEINIKKFAESDVKESKSEISPNQTTKLQGKSKATGRVMGGWI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgctattagtttacacttgggaaattgcaaatgcatcatcgaactttacatctgacata
acgccattgattttagcagctcataaaaataattatgaaatattaaaactacttctagat
cgtgcattagcattagcattagcattttattgtagatgcggttgcgacgaatgcgtcact
tccagcgaacaggattctcttcgacattcgcaatctcgaataaactcataccgagcactc
acttcgtcatctctcattgcgctttcatcgagagacccacttttgacggcgttcgagctt
tcatgggaactgcgtcgcctcagcagaatggagcaagaatttcgcgctcaatataacgag
atgcgggagcaaacgcagcaatttgcaaccgccttgttggatcacgcgcgtacgtcttat
gaattagaagtaatgttaaactacaaccctactggcgaaaattgggaccctggcgaaaga
cagaccttggaccgacttaaattggctattaaatataaacaaaagcaatttgtctctcat
ccaaacgtgcaacaattattagctgctatttggtatgacggtcttccgggatttaggaga
aaaagcatgatggcgcaattaatggaagtggccaagcttggtgcaatgtttccagtttat
agtgctatttatatgatagcgcctacttcgcaaatgggattgtttatgaagaaaccattt
gtaaaatttatatgtcattccgcatcatacgctttttttctaatgctacttggaatggca
tcacaaagggttgaatacttattaatcgaattgtttggtaatgagtggatgcgcgagata
cttgctggttggaagaaacgagaacgtggttgtattccaggtttcgttgagacaggcgtg
atcatctatgtgataagtttaatcatcagcgaaattaaatctttatgggcagacggctta
attgaatatatatcagatctgtggaatattgtggatttcattcaaaatacattttacgtg
atctggataagtatgcgtgttacggcttggtggatagtacagagagaatattggaatggt
ttagatccttggtatccaagagatcagtggcatgccttcgatccaatgctgctttcagaa
ggagcatttgcagccggaatgatatttagctttttgaaacttgtccatatattcagcgta
aatcctcatctcgggccactccagatttccctcgggaggatgataatagacattatcaaa
tttttcttcatctacaccctcgtgctatttgcctttggctgtggtatgaatcagttgatg
tggtattatgcggatttagaaaagaaaaaatgttatcatgcgtctgaggagttacccgat
tttgataatcaagaaaaagcctgttctatatggagaagatttgccaatttgttcgagaca
tcacaatctcttttttgggcaagttttggcatggtcgacttaatgtcatttgatttaacg
ggcattaagagtttcacgcgattctgggcactcttgatgttcggttcttattccgtgata
aatgtcattgtgttgttgaatatgctaattgctatgatgtctaattcttatcaaatcatt
tcggaaagatctgatacagaatggaaatttgctagaagtcacttatggatgagttatttt
gaagatggcgatactgtaccaccaccattcaatatgatcccaacgaataaaactttccaa
aaactatgcaaatgtggtggcgttggtcgttctacaacatctttcataaaaaaatctcga
gaaaaggctttgattagacatgacactgtaatgcgtctacttatacgtcgctatgtgaca
gctgaacaaaggaagcgagatgagtttggcattacagaggatgatgtcagagaaattcga
caggatatttccagttttcgatatgatttgatcgatatccttaggaaaaatgggatgtgc
accccagcgcttgataaagaagaaacaaatatacctggcaaaaaaggcagagtgatggaa
cgtcgtctccagaaggattttcaaattggtatagtggaaggtatcgtacaggccgtgatt
caaagtgaaaaggaaccgaaggacgtgtttagtcaaatcgcaaaggccattggacgaaaa
gggagcagtagcggtaagagagattggaacgccgtagtgagacaaagtaccatcacgatg
gatcctatcgggagtacgaacgaagcgatgcaacgtcaaacccggcgcagtttacgtcgc
catctggcataccagccgaattccgatctagcatccatggatccgaaacgactagtcgat
tataacccgaatctttcggattttacaccggctactagaatagcttatgccaaatttatg
ctaagcaagaataagctggacgagcagtctgaaggtataaataattcttcgacaacaact
gaggcggcacctcgaagaagcagcaaagttatgatagcgaaaacttcagacattccacga
cccgctattgaaacatttaagaaagatctattgaaatctacgagcagcaacagcatggat
aaagcgctagaaaaagtacttgatattaaagcttccgaagtcagatcaacatcacctata
cccgaggatcctctaggagaagaagtcaacaaacagtcgacatcttcagcaatatctgat
caggaaaagaaaatcgaaatgaaggaaaatgcgcaagaacaacaaaaagagaaagaaaca
agcgaagacaagacattagaagagcaaagacaagaagaaaaagtaaagaatgaaaaggaa
tgtcaacaatcagaaaatattaaaaagaataacagtgattacattgaagagaagacccca
gaaatcaataaagaaattaatataaaaaaattcgctgaatctgacgtaaaagaaagcaaa
tcagaaatatcaccaaatcaaactacaaaattgcaaggaaaatcaaaagcgactggtcga
gtaatgggaggctggatttaa
DBGET
integrated database retrieval system
