Pogonomyrmex barbatus (red harvester ant): 105426715
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Entry
105426715 CDS
T04903
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbar04040
]
105426715
Ion channels [BR:
pbar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105426715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
105426715
NCBI-ProteinID:
XP_011636355
UniProt:
A0A6I9W4Q0
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIEARIAEEQARQRELQQRRAEGEVRYDDEDEDEG
PQPDPMFEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKGKDIFRFSATDA
MWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIESTEVIFTGIYTFE
SAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVA
IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKNFPEDGSWG
NLTDESWVRFVSNETNWYMDEAKNIPLCGNSSGAGQCLPGYTCLQGFGANPNYGYTSFDT
FGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYD
ELQKKAEEEEAAEEEAMREAEEAALAKENKLAAQAAAREAAAAAAAAAAAAEEAADQIVK
SPSDFSCHSYELFVGQEKGNDDNNKEKMSIRSIESVGDQRHIKQINNNHSAANKVRKVSA
VPRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRTRCFVPPGGDRKP
LVLSTYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSYTSH
GDLAFPGIRGIDSIGKQITKQEQILRNRNNKQTTPANGHVTDTNQKTYLFETEEDPMGKT
KQQDNPFIEPSQQHTVVDMKDVMVLNDIIEQAAGRQSQTPEQGVSTYYFPTDDDEEPTFK
DKLLAGMFRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIVVNTLFMALDHHD
MDRDMERVLKSGNYFFTATFGIEATLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEG
VQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQL
FGKNYVDHVDLFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFL
ATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNILAF
AKLMRAKLTNQISDQAPGEGPSNSWKEEILYDCADGIDRDGDLDLADGELDAYRDKKSAK
ELNQLEVAIGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQNEDD
TISNKSYGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEDLEEEGEEGDELDEII
IHADEDPLQSNYPTDCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFRLIENKYFETAV
ITMILLSSLALALEDVHLQQRPILQDILYYMDRIFTVIFFIEMLIKWLALGFRKYFTNAW
CWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAI
PSIFNVLLVCLIFWLIFAIMGVQLFAGKYYKCVDANKTTLSYEIIPDRNACFAENYTWEN
SPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFG
SFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPRPRWR
PQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSKTFSNVLDYLNMIFIVIFTSECL
MKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRL
VKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKT
FGQSMILLFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVIS
FLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLD
VLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETADLDEVK
ARPDEAGYEPVSTTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCARQTKV
LVESDGYVTKNGHRVVIHSRSLSITSTTADV
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgaggctcgcatcgccgaggaacaggccaggcagagggag
cttcagcagagaagagcggaaggcgaggtgcgatatgacgacgaggacgaggacgaaggt
cctcagccggatccgatgttcgagcagggagcgccgatcccggtccgactgcacaacgaa
tttccacccgagttggcctccacacctctcgaggatattgatagcttctatcacaatcaa
aggaccttcgtcgtcattagcaagggaaaggatatattcaggttctcggcgacggacgcg
atgtggatgctcgacccgttcaaccctatacggcgtgtagccatatacatattggttcac
ccgctcttttccctcttcatcatcactacgatattggttaactgtatactcatgatcatg
cccaccacgcccaccatcgagtccaccgaagtgatatttacgggcatctacacatttgag
tccgccgttaaggtgatggcgaggggtttcattctgcagccttttacctatcttagagat
gcatggaattggctcgacttcgtagttatagctttagcttatgtgacgatgggcatagat
ctaggcaaccttgccgctctcaggacatttcgagtcctccgagccttgaagactgtcgct
attgtaccaggtctgaaaaccattgtcggcgctgtgatagaatccgtgaagaacctgcgc
gatgtgataatcctgacgatgttctccctctccgtctttgcgctgatgggccttcagatt
tatatgggggtcctcacgcaaaaatgtataaagaactttcctgaagacggctcctggggt
aatctcaccgacgaaagttgggtgcgatttgttagtaacgaaactaattggtacatggac
gaagctaaaaatatacccttatgcggaaattcatcgggggcggggcagtgccttcccggg
tacacgtgtttacaaggattcggcgctaatccgaattatggttacacgagcttcgacact
ttcggctgggcactgctctccgcctttcgtcttatgactcaggattattgggagaatcta
tatcaactggtgctaagatcggccggaccgtggcacatgctcttcttcatcgtcattatt
ttcctcggatctttctatctcgttaacttgattctcgctattgtcgcgatgtcgtacgac
gagttgcagaagaaagccgaagaggaggaggccgccgaggaagaagctatgagggaagcc
gaggaagctgcactggcaaaggagaacaagctcgcagcgcaggctgcggcgcgagaagcc
gcggccgcggctgcggcagcggccgccgccgcggaggaagctgcggaccagatcgtcaag
tccccgtcagacttctcgtgccacagctacgaactgttcgtcggccaggaaaagggcaac
gacgacaacaacaaggagaagatgagcatacgttcgatcgaatctgtcggcgaccagaga
cacatcaagcaaattaacaacaatcacagcgctgccaataaagtgcggaaagtcagcgcc
gtccctcgcgccgctaatggccagtttacttatgcctaccaggaaagcctgcggaaggcg
agcctgagcctacccggctcaccgttcaacctgcgccgcagcagccgtggcagccaccag
ttcacgatacgcaacggccgcacccgatgcttcgtgccgccgggcggcgaccggaaaccc
ctcgtgctgtcgacgtatctggacgcccaggaacacctgccctacgccgacgactcgaac
gcggtcacaccgatgtccgaggagaacggcacgatcgtggtgccggtgtactacgcgaat
ctcggttcgcgccactcgtcctacacgtcgcacgcctcgcggctctcctacacgtcccac
ggtgacctggccttccccggtatccgtggcatcgacagcatcggcaagcagatcaccaag
caggagcagatcctcaggaatagaaacaacaaacagacaacgccggccaatggccacgtt
acggacaccaatcagaagacttatctctttgaaaccgaagaagatcccatgggcaagacc
aagcaacaagacaatccgtttatcgagccgtctcagcagcacaccgtggttgacatgaag
gatgtaatggtgctgaacgacataatcgagcaagctgccggtcgccagagccagacgccg
gaacaaggagtttcgacctattactttccgacagacgacgatgaagaacctacgttcaag
gacaagttattggccggaatgtttcgttgtatcgacatcttttgcgtctgggattgctgt
tggctctggctcgagtttcaaaagtacgtgtccctgttggtctttgatccgttcgtagaa
ctcttcatcacgctctgtatcgtcgtcaatacgctcttcatggcactggatcatcacgac
atggacagagacatggaaagagtgctcaaatctggcaattactttttcacggcgacgttc
ggcatcgaggcaactctgaagctgatagcgatgagcccgaagtattattttcaagagggc
tggaatattttcgattttattatcgtcgctctctcgcttctggagttgggcctcgaaggc
gtgcaaggtctgtcggtattacgatccttcagattgctaagggtattcaaactcgctaaa
tcgtggcctacgttgaatctgctgatctccatcatgggcagaacggtgggcgcgttgggt
aatctgacgttcgtattgtgcatcatcatcttcatcttcgccgtgatgggtatgcagctc
ttcggcaagaactacgtcgaccacgtcgacctcttcccggatggtgatctacccagatgg
aacttcaccgatttcatgcactcattcatgatcgtttttcgagtgttgtgcggagagtgg
atcgagtctatgtgggactgtatgctggtcggcgacgtttcttgcattccattcttctta
gccaccgtcgtcatcggtaatttggtcgtcctgaatctcttcttagctctgttgctgagc
aacttcggttcgtcgaatctgtcagccccgactgcggacaacgacacgaacaagatcgcg
gaggcgatcgatcgaatagcccgtttcattaagtggatcaagcgaaatatccttgctttt
gctaagttgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgaggga
ccgtccaacagttggaaagaagagattttgtatgactgtgcagatgggattgatcgcgat
ggggacctagatcttgcagatggagaattggacgcatacagagacaagaagagcgccaaa
gaacttaatcaacttgaagttgccattggcgacgggatggaatttaccattcatggagat
ttgaagaacaaactgaagagaggcaagttatgcatgaataatacaaaagttatcgcgaat
tcaataaaccaccacgattatagattggacaacgattatatcaatcagaacgaggatgac
actatcagtaacaaatcgtatggcagtcacaaaaaccgcgcatttaaggatgaaagtcac
aaaggcagtatggattcgctaaatggcgaagagaagaaagatgcgagcaaagaagatttg
gaacaagaagaagatctagaagaggaaggtgaagaaggagacgaacttgacgagataata
atacatgcggatgaagatcctttgcaatcaaattaccccaccgattgctgtccagaaaat
tgttacaaaaagtttccatttctggccggtgacgacgatgctccgttttggcaaggctgg
gcgaacttgaggttaaagacctttcggctaatcgagaacaagtatttcgagactgccgtt
atcaccatgatccttctaagtagcctggccttggctttggaggacgttcatcttcaacaa
cgacctatcctacaggacatattatattacatggaccgaatattcactgtgattttcttc
atcgagatgttgatcaagtggctggctctaggatttagaaaatattttacaaatgcctgg
tgctggctcgacttcatcatcgtcatggtatcgctcattaacttcgtagcgtcgctctgt
ggcgctggcgggattcaagccttcaaaacaatgcggaccctaagggccctaaggccgctc
agggcgatgtctagaatgcaggggatgcgggtagtcgttaacgctttggtccaagccatt
ccatccatctttaacgtattgctggtatgccttattttctggcttatattcgctatcatg
ggggtacagctgttcgctggcaaatattataagtgtgttgacgcaaacaagacgacgctc
agttacgagataataccggatcgtaatgcctgtttcgctgagaattatacatgggaaaat
tcgccgatgaatttcgaccatgtcggaaaagcgtacctgtgcttattccaagtggcaact
ttcaaaggttggatccaaatcatgaacgacgcgatcgattccagagaggtcgacaagcaa
ccgattcgggagacgaacatttacatgtatctctacttcgtatttttcattatatttgga
tcgttttttaccctcaacctgtttatcggagttatcatcgacaactttaacgagcaaaag
aagaaagccggcggatccctcgagatgttcatgacggaagatcagaagaaatattacaat
gccatgaagaaaatgggcaataagaaacctctaaaagctattcctcgaccgaggtggcgg
ccgcaggcaatagtgtttgaaatagtgacggacaaaaagttcgatatgataatcatgctg
ttcatcgggctgaacatgctcacgatgacattggaccattatcagcagagcaagacgttc
agcaacgttctggactatctcaacatgatattcattgtgatattcaccagcgagtgtctc
atgaagatcttcgctcttcgctaccactatttcaaggagccatggaatctctttgatttt
gttgttgttatattgtcaatattaggtctggtgctcagcgatattattgagaaatatttc
gtgtcgccgactttgcttcgtgtagtgagagtggcaaaagtcggtcgtgtgcttcgactc
gtgaaaggtgccaagggtatccgaacccttctcttcgccctggcgatgtcattgccagcc
ctcttcaacatttgcctactgctgtttttggtgatgtttatcttcgcgatattcggcatg
tctttcttcatgcacgtcaaagacaagagcggactggacgatgtgtacaatttcaagacg
tttggacagtcgatgatactactgtttcagatgtcaacgtcggccggttgggacagtgtt
ctcgacggtataataaacgaggaggactgccaggagccgaacaacgagatcggctatcct
ggcaattgcgggtcctcgacaatcgggatcgcttacctgctctcatacctcgtgatcagc
ttcctgatcgtcatcaacatgtacatcgctgtgatcctcgagaattactcgcaggccacc
gaggatgtgcaggaaggtctgacggacgacgactacgacatgtactacgagatctggcag
caatttgatccggacggcacgcaatacatcagatacgaccagctatctgacttcttggac
gtattggaacccccgttgcagatacataagcccaacaaatataagatcgtgtcgatggat
atccccatatgtaagggagatcttatgttttgcgtggatatcctcgatgccctcaccaaa
gactttttcgcacggaagggcaatccaatagaggagacggccgatctggacgaggtcaag
gcccggcccgacgaggccggctacgagccggtctcgaccaccctgtggcggcaacgcgag
gagtattgtgcccgcctgatacagaacgcctggcggaagcacaagcagcagcgtctgggc
gggccgagcgaggagagcgacgatccggacaccgatctgtgcgcccggcagaccaaggtg
ctcgtcgagagcgacggctacgtcacgaagaacggtcaccgcgtcgtcatacacagccga
tcgctgagcattacttcgacaaccgcggacgtctga
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integrated database retrieval system
