Pogonomyrmex barbatus (red harvester ant): 105432695
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Entry
105432695 CDS
T04903
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105432695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432695
03041 Spliceosome [BR:
pbar03041
]
105432695
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105432695
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105432695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
PQQ_3
Beta-prop_RIG_2nd
Beta-prop_LRRK2
WD40_like
EIF3I
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105432695
NCBI-ProteinID:
XP_011645922
UniProt:
A0A6I9WTW1
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MIEPSDKKLLYNTVLSQTFSPDGNYLLAGNIYGDVSVFDLLKVLGPNKVEENELQGPNYR
FAAHPEQEVACMLSVENFLVTGTRGEIAGWDWKVITSNKAPKSKVSWNIQIPANKDSYDK
PDINYMVHSKVDNLLYVGCGDNNIYVISLEDRKILRSMQGHTDYIHCLAIMDNQLASCSE
DGSVRLWDLRKRENTNILTPHLIDKVARPRYGKWIGAVDFTEDWLLCGGGPSLSLWHMRT
MEVATVFDLADQGIHVAEIYEERVIAGGATDHVHHMTYQGEILAKVPTSSLTVYSVVHQE
TPHKMLSVAGSSNCIDISTNFNYREMTLKFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaccatccgacaagaaattgctttacaacaccgtattgtcacagacattctca
cccgatggaaattatcttttagctggcaatatttatggagatgtatcagtatttgatctg
ttgaaggtcttagggcccaataaggtagaagagaatgagttacaaggacctaattatcgc
tttgctgcgcaccctgaacaagaagttgcatgtatgctctctgtggagaattttcttgtg
acaggaacacgtggtgaaatagcgggttgggactggaaagtgattacatcaaataaagct
cctaagagtaaagtttcttggaacatacaaattcctgctaataaagacagttatgataag
ccagatataaattatatggtacattcaaaagtggataatttattatatgttggctgtggt
gataataatatttatgttataagcttagaggatagaaagattctgagaagtatgcagggc
cataccgattacattcattgtcttgccataatggataatcagcttgcctcctgcagtgaa
gatggttctgtgagattatgggatttgcgtaagagagaaaacactaacatactaacacca
catttaatagataaagttgctcgaccacgatatggaaaatggattggcgctgttgatttt
acagaagattggttgttatgtggtggtggacctagtctgtcgttatggcatatgcgcacg
atggaagtagcgacagtttttgatttggctgatcaaggaattcatgtagcagaaatttac
gaggaacgcgtgatcgccggtggtgcaactgatcacgttcatcacatgacatatcaaggc
gaaattcttgctaaagttcctacttcgagtctcaccgtctatagtgtggtgcatcaagaa
acaccacacaagatgctcagtgttgctggctcctcaaattgcattgatatcagtacaaat
ttcaattatcgcgagatgacgctcaagtttgcataa
DBGET
integrated database retrieval system
