Pogonomyrmex barbatus (red harvester ant): 105432869
Help
Entry
105432869 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105432869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbar03041
]
105432869
Spliceosome [BR:
pbar03041
]
Complex A
U1 snRNP components
U1 related factors
105432869
Complex B
105432869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
RodZ_C
Motif
Other DBs
NCBI-GeneID:
105432869
NCBI-ProteinID:
XP_011646147
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MDATSEQPAAIAATESASTSEQEHNDEAMEETEEYNYEGDDYRHFMPRGRGGFRGGFDFP
MRGGGPPRFRGRGFGPRGPMFRGANNGFPFEGPPRPNCPPGPAGPRFRGPPPFDPSWGPM
GPPNLMGPPNLMGPPGMPPPHMMNGPMGAGPGPYGPPPGMGPPNMNSIPGQQPPQQAQQQ
ANIPGLDLNGEVWVETKAADGKSYYYNIRTRDTTWTKPEGPNVKVMVQDQLEQLVHGAXK
QAARSTTPTPSGNTPTQINENRISQGGEQSSSNSTDAINQLSTAPPGTGPPPTLNDTPDV
SNQTAETNQSNGAAPATVTSTPPINTPAVNTNMMQPPPNMIPMQHRMPNQFGSPIATQFG
AAPFGMPPPGFQPFGGYGPPQANWGMPQMPHGVMAPQAPAEDPAILAQLDSELVAAAMVW
TEHRAPDGRFYYYNSKAGESVWEKPQALKDLENAKLTLRQKNEEATIVPTSTAVTTTPVT
NNSTTIEPIKQEKPQENAHETKDSTKDTDSTKLKKEENAVKESAKPQDKSRPISSTPVPG
TPWCVVWTGDGRVFFYNPSSRISVWERPDDLVGRQDVDKMVSTPPDAVAATKPVRQSDTS
ESSDDDQPTPAKKIKHDDTKTTPIKEEEEKEGKKGTIDIGKEAAIEAEVRAARERAIVPL
ETRIKSFRDMLAEKDVSAFSTWEKELHKIVFDPRYLLLTSKERKQVFEKYVKERAEEERR
EKRNKMKERKEQFQKLLEEAGLHGKSSFSDFAQKHGRDERFKNVEKMRERESLFNEYLLE
VRKREKEEKTAKREQVKKEFFAMLREHKDIDRHSHWSDCKKKLETDWRYRVVESASTRED
WFRDYVRMLKDERKKEKEKDKDHRHREKDHKADKKDRDRKDTDKGKETKSSKDKGDKDNT
REKKQRKSEAPVEENEKEKKEMMVEKESGEIEESDDKSVKKENDKEEGDDHSDSEEDREK
QKRERERRAEVSLREREREVQRTLATHLRDRDKERQHHRHTEAVQHFSALLADLVRNGDL
AWREAKRQLRKDHRWELAESLDREEKERLFNEHIEQLGRKKRDKFRELLDEVGASTELTA
SWKDIKKSLKDDPRYLKFSSSDRKCEKEFKEYIKDKLVAAKADFRELLQETKLITDKTYK
KVQENSSHLAEIEEILRKDRRFLVLEAAAAERTRLLMGYLEELARRGPPPPPTASEPSRR
STTN
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaccagcgagcagccggccgcgatcgcggccactgagtccgcctccaccagc
gagcaggaacacaatgacgaggccatggaggagacggaggagtacaactacgagggcgat
gattacaggcattttatgccgcgcggccgcggtggatttcgaggtgggtttgatttccct
atgagaggtggtggacctccaaggtttcgaggtagaggttttggaccacgtggaccaatg
tttcgtggagcaaacaatggatttccctttgaaggaccaccaaggccaaattgtccacct
ggcccagcaggaccaagatttagaggaccgccaccatttgatcctagctggggacctatg
ggaccacctaatctcatgggccctccaaacctaatggggcctccaggaatgccaccacca
catatgatgaatggtcctatgggtgcaggaccagggccatatgggccacctcctggaatg
gggccacctaacatgaacagcattccaggacaacagccaccgcaacaagcgcaacaacag
gcaaacattccaggtctagatctcaacggagaagtgtgggtagagacaaaagcagctgac
ggcaaatcgtattattacaatatccgtacgagagataccacatggactaaaccggaggga
ccaaatgtgaaggtcatggtacaagatcaattagaacagttggtacacggtgcantcaaa
caggcagcgcgttctactacgcctactccgtcgggtaatacgccgactcagattaatgaa
aacagaatctctcaaggtggtgaacaatcgtcctctaacagcacagatgccattaatcaa
ttaagtacggcgccccctggtactggaccaccgcctacattgaatgacacaccagacgtc
agtaatcaaacagctgagactaatcagtcaaacggcgcagcacccgcaacggttaccagc
acaccgccaataaatacaccggcggtaaatacgaacatgatgcaaccgccgccaaacatg
atccccatgcagcatagaatgccaaatcagtttggtagtccaatcgccacacaattcgga
gcggcaccctttggaatgccaccacctggttttcaaccctttggcggttatggaccacca
caagcaaattggggtatgccgcaaatgccgcatggtgtaatggcacctcaagcgcccgct
gaagatcctgctatacttgcacaacttgattctgaattagtagcagctgctatggtttgg
actgagcatcgtgcaccggacggtagattctattattataacagtaaggcaggagaatca
gtatgggagaaaccacaagccttgaaggatctggaaaatgcgaaattaacgttacggcag
aaaaatgaggaagctactattgtcccaactagtactgctgttacaactactcctgttact
aataacagcactacgatagaacctatcaaacaagagaaaccgcaagagaacgctcatgaa
accaaagatagtacaaaagatacggatagcactaaactgaagaaagaggaaaatgctgtg
aaggaatctgcaaagcctcaagacaagtctagaccaatctctagtacgccagtgcctgga
actccatggtgtgttgtttggacgggagacggacgggtatttttttacaatccttcttcg
cgaatatcagtctgggaaaggccagatgatctcgttggtcgtcaggatgtagacaaaatg
gtatcgacgccaccggatgcggttgctgctacaaaaccagtacgtcagtcggacactagc
gagagcagcgatgatgatcaacccacaccagcaaagaagataaaacacgatgataccaaa
accacacccataaaggaagaagaagagaaggaaggaaagaaggggacaatcgatataggt
aaagaagctgcgatagaggccgaggtgagggcagcgagggaaagggcgatagttccattg
gaaacgagaatcaagtcgttcagggatatgcttgcagagaaagatgtatctgcattcagt
acttgggaaaaagaactccataaaatagtgtttgatccgcgctacctacttctaacgtcg
aaagaaaggaaacaggtcttcgagaaatacgtgaaggagagagcggaagaagaaaggcga
gaaaagaggaataagatgaaagaacgaaaggaacaattccaaaagctcttagaagaagct
ggacttcatggaaaatcatcgtttagcgattttgctcaaaaacacggcagagatgaacga
tttaagaatgtagaaaagatgcgcgaacgagaaagccttttcaacgaatatcttctggaa
gtgcgaaagagggaaaaagaggaaaaaacagcgaaacgagaacaggtgaaaaaggaattc
tttgcgatgctacgtgagcacaaagacatcgacagacattcgcattggagcgattgtaag
aaaaaattggaaacggattggaggtacagagtcgtagaatcggcaagcacgcgggaagat
tggtttagagattacgttcgcatgctgaaggatgagcggaaaaaggaaaaggagaaagac
aaagaccatcggcacagagagaaagatcacaaggcggacaagaaggatagagatcgtaag
gataccgacaaaggtaaagagacaaagtccagcaaggacaaaggtgacaaagataataca
agggaaaagaagcaacgaaagagcgaagcacccgtggaggaaaatgaaaaggaaaaaaag
gagatgatggtagagaaagagagcggggaaatcgaagaaagtgacgacaaaagcgttaaa
aaagagaatgacaaggaagagggagatgaccattccgattcggaggaggatcgcgagaaa
cagaaaagggaacgtgaaagacgagcggaagttagtcttcgagaaagagagagagaagtg
caaaggactttagctacacatcttcgcgatagagataaggagagacagcatcatcgtcat
acagaggcagttcaacatttcagcgctctcctagctgacttggtaagaaacggcgatctg
gcatggagagaagcaaaacgacaattaaggaaggatcatagatgggagttggctgaaagt
ttagatcgtgaggaaaaagaacgattatttaacgaacatattgaacaattgggacggaag
aaacgcgataaatttcgggaattgctcgacgaagtaggcgcatcgaccgagctaacggca
tcctggaaagacattaagaaatcattgaaagacgatcctagatatttgaagttttcttct
agcgatcgaaaatgtgagaaggagtttaaggaatacatcaaggacaaactcgtcgcagcc
aaagctgattttagggaacttctacaggaaacgaaactgatcactgacaaaacgtacaaa
aaagttcaagagaacagctcgcatttagcagagattgaagaaattcttagaaaggatcgc
agatttctcgtgcttgaggctgcagccgccgaacggactcgattattaatgggctatcta
gaggaattggcacgtagaggacctccgccacctcctactgcttcggaaccatcgaggaga
tcaactacaaattga
DBGET
integrated database retrieval system