Pogonomyrmex barbatus (red harvester ant): 105433062
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Entry
105433062 CDS
T04903
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105433062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105433062
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105433062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Nucleoporin_FG
TSNAXIP1_N
Motif
Other DBs
NCBI-GeneID:
105433062
NCBI-ProteinID:
XP_011646453
UniProt:
A0A6I9WV58
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGKRAATTELNHDNWNEESEPEDAGTFALAANDILEKRVIKTARRRLPSKDGAPVKSAF
GTFSGFKTTPVTSPSPFSFLANVSNASNTTDTSSVAVTAVNTNSRQIASNGSSKTSKNDA
DKKENPTKLQTLSNTNTSKKTSVEQKNEKTKKHSSDYHAKLKGLNESVATWIKSHVDANP
FCILTPIFKDYERYLKEITSKEESTKAQTSHIAEHTKQIASNNSKQDINMEKKLEKSPFG
NLNANTNSPLTTGTEWKPEKSIFSNINANTKSIFSNTEQKTESPKSVFGTDMTSDKSKSI
FGNIDSNVASKSIFGNTNVESNPFLHKSAVSDSGKTDEEEAKSSAKSVASTFPTFSFGQS
CATSNVTAGFSFGSAKPFSFAPQAVKPQDSEDKTDNENKDEEDEEPPKPDFKPVAEEGAI
YEQRCKVFVKKDNNYSDKGVGMLYLKPTPNGKTQLIVRADTALGNLLLNTLLTQSILTKR
MNKNTIMLICLPMPDSSPPPVPVLLRVKTDEIADELLEALNKHKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaagcgagcagcaacaacagaattgaatcatgacaattggaatgaagagagt
gaaccagaagatgcaggaacatttgcattagcagcgaacgatatacttgagaagagagtt
ataaagacagcaaggcgtcgtttaccatcaaaagatggagctccggtgaagagtgcattt
gggacatttagtggttttaaaaccactcctgtaacgagtccatctccattcagtttttta
gctaatgtaagcaatgcgtctaatacaactgatacttcttctgtagcagtgacggctgta
aatacgaacagtaggcaaattgcaagcaatggttcttctaagacttccaagaacgatgct
gataaaaaggaaaaccctaccaaattgcagacactatcaaatacaaatacaagcaagaag
acttctgttgagcaaaagaatgagaagacaaaaaaacactcgtcggattatcacgcaaaa
ttgaagggactgaatgagagtgtcgctacatggataaaaagtcatgtagatgctaatcca
ttttgtatattaacacctatatttaaagattatgagagatatttgaaagagattacatca
aaagaagaaagtaccaaagcgcagacctcgcacattgcagagcacacaaaacagattgca
tcgaacaatagcaagcaagatataaacatggaaaaaaaattagagaaatcgccatttggc
aatttgaacgcgaatacaaactcccctttaactactggcacggaatggaaaccagaaaaa
tcgatattttctaacataaatgcaaatactaaatcaatatttagtaacacagaacagaaa
acagaaagccctaaatctgtatttggtacagatatgacttctgataagagcaaatctatt
tttggaaacattgactcgaatgttgctagtaaaagtatatttggcaacacgaacgtggaa
agtaatcctttcttacacaaatctgcagtttcagacagtggaaagacagatgaagaagaa
gcaaaatctagtgcgaagtctgtcgcttctacttttcctacctttagttttggacagagt
tgtgctactagtaatgtgactgctggatttagttttggaagtgcaaagccattttcattt
gctcctcaagcggtaaaaccgcaggactccgaggataaaactgacaatgaaaataaagat
gaggaagatgaggaacctccaaaaccagattttaaaccagtagctgaagaaggtgctatt
tatgaacaaaggtgtaaagtttttgtgaagaaagacaacaattacagtgacaaaggcgtt
ggaatgttatatctgaaaccaacaccaaacggaaagacacaattgatagtacgtgccgat
actgctttgggtaatctgttacttaatactctgttaactcaaagcattctcaccaaacgc
atgaacaagaatacaataatgttgatttgcctaccgatgccagattcctcgccaccacca
gtcccagtactattaagagtgaaaactgatgaaatcgcggatgaattattagaagcattg
aataaacataaaaaatag
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