Prionailurus bengalensis (leopard cat): 122481607
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Entry
122481607 CDS
T07574
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122481607 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbg03041
]
122481607 (SF3B1)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122481607 (SF3B1)
Spliceosome [BR:
pbg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122481607 (SF3B1)
Complex B
122481607 (SF3B1)
Complex C
U2 SnRNP specific factors
122481607 (SF3B1)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122481607 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
VPS15-like_hel
Adaptin_N
Phage_T7_Gp15
UNC45-central
TALPID3
Motif
Other DBs
NCBI-GeneID:
122481607
NCBI-ProteinID:
XP_043433326
LinkDB
All DBs
Position
C1:complement(184630581..184690141)
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AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagccgctttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcactgcttaatgatataccacaatcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgctgaccgggaagatgaatacaaa
aagcacaggcggaccatgataatatccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttaaccaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ttaaaagttgtcaatggagcagcagcgtcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagccgatcagactcctggtgccactcctaaaaaactatcaagttgggatcaa
gcagagacccccggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagccac
acaccagcgggagctgctactcctggacgcggcgatacgccaggccatgcaacaccaggc
cacggaggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagcggatgggctgagactcctcgaacagatcgaggtgga
gattcaattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacacctggaaagacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactccc
gaacagcttcaagcttggaggtgggaaagagaaattgatgagagaaaccgtccactttct
gatgaagaattagatgccatgtttccagaaggatataaggtacttccccctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacgcctttgggtggt
atgactggtttccacatgcaaactgaagatagaacaatgaaaagtgttaatgaccaacca
tctgggaatctgccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagctt
cttttaaaaattaagaatggaacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctcttctgatg
tctcctacacttgaggatcaagagcgtcatttacttgtgaaagttattgatcgaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtcattgaacca
ttgctaattgatgaagattactatgctagagtggaaggtcgagagattatttctaatttg
gcaaaggcggctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgagtatgttcgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattgttgcccttcttaaaagctgtgtgtaaaagtaagaagtcctggcaagcg
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgagcatggtcttgtggatgagcaacagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtgttaaagcctctatggaagggtatccgtcaacacagagga
aagggtctggctgctttcttaaaggctattggctatcttattcctcttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaatttcagtcacct
gatgaggaaatgaagaaaattgtgctgaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttctggcaa
cacagaatggctttggatagaagaaattaccgacagttagttgatactactgtggaattg
gcaaacaaagtaggtgcggcagaaattatttccaggattgtggatgatctgaaggatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacagttgattgatggtattctttatgctttc
caagaacagactacagaggactctgtaatgttgaatggctttggcacagtggtcaatgct
cttggcaaacgagtcaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatttctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcattgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctcctgcctagactc
acccccatcttaaagaacaggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgacaggggagctgagtatgtgtctgcgagagaatggatgaggatttgtttt
gagcttctggagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggttacattgcaaaggccattggtcctcatgatgtattggctacactcttaaacaac
ctcaaagttcaagaaaggcagaacagagtttgtaccactgtagcaatagctattgttgcc
gaaacgtgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgag
ctgaatgtccaaaatggagtcttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccgttacttgaagatgctttaatggatagg
gaccttgtacacagacagacggctagtgcagtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcatttgttgaactatgtatggcccaatgtgttt
gagacatcgccccatgtaattcaagcagttatgggagccctggagggcctgagagttgct
attggaccatgtagaatgttacagtattgtttacagggtttgtttcacccggcccggaaa
gtcagagacgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system
