Prionailurus bengalensis (leopard cat): 122487995
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Entry
122487995 CDS
T07574
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122487995 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122487995 (NUP42)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122487995 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
122487995
NCBI-ProteinID:
XP_043445017
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Position
A2:114850762..114868527
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AA seq
417 aa
AA seq
DB search
MTICQFFLQGRCRFGDRCWNEHPGAGGAGGGRQQQPSGSNRRGWNPSSQRYSSVIQPSSF
SKSTPWGGSRDQEKPSFSSSDSGASNSRNRGFGLSQNPFASPSSDEQKDEKKLLEGIIKD
MEVWESSGQWMFSVYSPVKKKPNISGFTDISPEELRLEYHNYLTSNNLQSYLNSLQQLIN
QWRNRVNELKNLNTSANIASLSDVKGGVNQAAATFGFGSMQGITFGPPGFPVHNSSSANA
QNFSFKPSSGFASAASGSPSVFGNTPAFGAAPPASSAITASTPTFGFGKPAITSAASFSF
KSPAASGFGSPGFSGFPASMAAGSVGAPAFGSGNSVAGFGNLGSHSHSAFSKSSSDTFGN
SSISTSLPVSNGSITTDNVLFTPKDQLTAEELEQFQSKKFTLGKIPLKPPPVELLNI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttgtcaattcttccttcaaggccggtgccgctttggagaccggtgctggaac
gaacatcccggcgccgggggtgcgggcgggggacggcagcaacaaccctcaggtagtaac
agacgtggatggaatccctccagccagagatactcgagtgttatccagccatccagcttc
tccaaatccacaccatgggggggcagcagagatcaagaaaagccatctttcagttcttcg
gattctggagcttcaaatagcaggaacagggggtttggactatcccagaatccatttgct
tcacccagctctgatgagcagaaagatgaaaagaaacttctagaaggaattataaaagat
atggaagtttgggaatcatcagggcagtggatgttttctgtttattcgccagtgaaaaag
aagcctaatatttcaggttttacagacatttcaccagaggaattgaggcttgaataccat
aactacttaaccagcaataacttacagagttatctgaattccctccaacagttaataaat
cagtggagaaacagagtaaatgaactgaaaaatctaaatacatcggctaacatagcttcg
ctctcagatgtaaagggtggagtaaatcaagcagcagctacatttggatttggcagtatg
caaggaataacatttgggccaccaggttttccagtgcataacagcagcagtgctaatgct
cagaattttagttttaaaccaagctctggatttgcctctgccgcttctggaagtccttct
gtgtttgggaatactccagcgtttggagccgcaccccctgccagttctgccatcactgct
tccactccaacgtttggatttgggaaacctgcaatcacatctgctgcttcattttctttt
aaaagtcctgcagcttccggttttggatcacctggattttcaggatttccagcttccatg
gcagcaggctctgttggagccccagcctttggaagtggcaattctgtggctggttttggt
aatctaggctcacattctcacagtgctttttccaagtcatccagtgacacctttggaaat
agcagcatatccacctctttaccagtctcaaatggcagcatcacaacagataatgtgtta
ttcacacccaaggatcaactaacagcagaagaactggagcagtttcaatccaagaaattt
actctgggaaaaattccattaaagccaccacctgtggaacttctaaatatttga
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