Prionailurus bengalensis (leopard cat): 122490480
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Entry
122490480 CDS
T07574
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg04820
Cytoskeleton in muscle cells
pbg04974
Protein digestion and absorption
pbg05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122490480 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122490480 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122490480 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122490480 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122490480 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122490480 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pbg00535
]
122490480 (COL9A1)
Proteoglycans [BR:
pbg00535
]
Extracellular matrix (ECM) proteoglycans
Others
122490480 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
DUF4882
Motif
Other DBs
NCBI-GeneID:
122490480
NCBI-ProteinID:
XP_043449107
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All DBs
Position
B2:complement(63165885..63255089)
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AA seq
921 aa
AA seq
DB search
MKNFWKIPVFFFVYSFLGSWASAVVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQISVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITVIETTDQRGPPGQQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPVGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLSGITGIVGAK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGETGPKGDRGPQGSRGIPGVPGSKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGAVGEPGPKGEQGSSGEEGEAGERGELGDIGLPGPKGSVGNPGDPGLRGPEGSR
GLPGVEGPPGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTMQAGQRAFIKGPDQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaattccagttttcttctttgtctacagtttcctgggatcttgg
gcatctgcagttgtcaagcgtcgtccaaggttccctgttaattcaaactctaatggtgga
aatgaactctgtccaaaggttaggattggccaagatgatttaccagggtttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtgggatca
acggcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg
catttatatcccagtggtctgcctgaagaatactcctttttaactactttccggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggtgtgaagattaatggccaaaccaaatctgttgcattttcatacaagggactg
gatggaagtctccaaactgcaaccttttcaaatttgccttccttgtttgattcccagtgg
cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attgaatccttacctataaagccaagaggccaaatcagcgtcgatggctttgctgtgcta
ggaaaacttgtggataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cactgtgacccactacgcccgaggagagaaacctgccatgaactgccagctaggataact
gtcatcgagaccaccgaccagagaggtcccccaggccagcagggtccccccgggcctccg
ggcccccctggagttccgggcatcgatggcatcgacggtgaccgaggtccaaagggtccc
ccgggccccccgggtcctgctggagaaccgggcaagccaggagctccgggcaagccaggc
actccgggcgcggacgggttaacaggacctgatggatcccctggctctgtgggaccaaga
ggacaaaaaggagaacctggtgttccgggatctcgtggatttcctggccgtggtattcct
ggaccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca
gttggtgaccctgggaaaagaggaccacctggcccccctggccccccaggacccagtgga
acaattggttttcatgatggagatccattgtgtcccaattcctgtccaccaggtcgctca
ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
cctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacagggagaagtcgga
gctcaaggacctccaggagctcaaggattaagtggcatcactggcatagttggggccaaa
ggggaaaaaggtgctcggggcttagatggagaacctgggcctcaaggtctccctggtgca
cctggtgatcaaggacagcgaggacctccaggagaaacaggtcccaagggagatagagga
cctcaaggttctagaggaattcctggtgtccctgggtccaaaggagacacgggcttgcca
ggtgtggatggccgtgatgggatacctggaatgcctggaacaaagggtgaaccagggaaa
cctgggcctcctggtgatgcaggattgcaagggttacctggtgtacctgggatccctgga
gcaaagggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcaattg
gggaattcaggcaaaccgggccaacaggggcctccaggagaagtgggaccccgaggaccc
cgagggcttcctggcagcagaggtgaaataggaccagtgggacccccaggaccaccaggt
aaactgggttctctgggtagtcctggcctccctggcttgcctggcccccctggacttcct
ggaatgaaaggtgacaggggagcagttggtgaacctggtccaaagggtgaacagggttcc
tctggtgaagaaggagaagcaggagaaaggggtgaacttggagatataggattacctggg
ccaaagggatctgtgggtaaccctggggaccctggcttgagggggcctgaaggcagtcgg
gggcttcccggagtggaaggaccgccaggaccacctggaccgcgaggcgtgcagggagag
cagggtgccaccggcctgcctggcatccagggccctccaggtagagcaccaacagatcag
cacataaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgctagt
ctcaagcgaccggactcaggagcctctggcctccctgggaggcctggaccccctggtccc
ccaggacctcctggagagaatggtttcccaggccagatgggacttcgtggcctcccaggc
attaaaggcccccctggtgctcttggtttgagggggcctaaaggtgacttgggagaaagg
ggggaacgtggccctccaggaagaggtcctaagggcttgcccggagctacgggtctccca
ggtgaaccaggtcctgccagctatgggaggaatggccgggatggcgagcgaggcccccct
ggggtggcaggaattcctggtgtacccggccccccgggacctcctgggcctcctggtttt
tgtgagccagcctcctgcaccatgcaggctggtcaacgagcatttatcaaagggcctgat
cagtga
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