Python bivittatus (Burmese python): 103067420
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Entry
103067420 CDS
T03091
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103067420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbi03019
]
103067420
Messenger RNA biogenesis [BR:
pbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103067420
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103067420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
DUF2891
Motif
Other DBs
NCBI-GeneID:
103067420
NCBI-ProteinID:
XP_007441746
UniProt:
A0A9F2RAF7
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
QAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEVLHLLLSHLLFGQKGAFGVGQEQI
DAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRILPDSGGIAKTMMESSLADFMQEVG
YGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMARTHSGLTDGIPLQSISAPGSGIWSD
GRDKNDGTQTHTWNVEVLIDVLKELNPALNFKEVTYELDHPGFQIRDSKGLQIVVYGVQR
GLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFCFADYPCHTVATDILKAPPEDDNR
EIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHCPDMLVLALLQINTSWHTLRHELI
STLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMHAMAEWYMRGEQYDQAKLSRILDV
AQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRR
CPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAGSVSQELSETILTMVANCSNVVNK
ARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMASLSLGGPTVPHTQSVPGFPPNLSS
AFSTPQSPAKAFPPLSAQNQNTPFSGIGGLSSQLPVGGLTTGSLGIGTGALGLPAVNNDP
FVPRKLNTSGLNQPTFQQSKVKPSDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPT
MSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEK
GLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFIQ
FPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQAQAPAKTPLAGQVSTIVTTA
TTTTTVAKTTIAPVGRVSFKKDVPPSINTTNIDTLLVATDQTERIVEPPENVQEKIAFIF
NNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNK
MVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLE
AYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEI
EVLCKNLALDINDLKPGSLLKDKDRLKNLDEQLSAPKKDVKQAEELPPITTSTTSTTSAT
STTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQE
LVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLM
SIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRL
ATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVRNFNMKSSTCEQETTWC
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
caagctgctcagtttattaaacagaaacttcctgatcttctgcgttcatatattgacgca
gacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtcttgcacctc
cttctttcccatcttctttttgggcagaagggagcctttggggttggacaagaacaaatt
gacgcttttctcaaaacattgcgcagagattttccccaggagcgttgccctgtggtgctt
gcaccactcctataccctgaaaaacgggacattctaatggacaggatcctgcctgattct
ggagggatagcaaaaaccatgatggagagttctcttgcagacttcatgcaggaagttggc
tatggcttttgtacaagtgtggaagaatgtcgcagtatcatcacacagtttggtgttggg
gaggtcacagctgcccaggttgccagagttttgggaatgatggctcggacacactctgga
ctgacagatggcattccattacagtctatctctgcccctggaagtggaatttggagcgat
ggaagagataaaaatgatggaacgcagactcatacatggaatgtggaggttttgattgat
gtgcttaaggaactgaatccagccttaaacttcaaggaagtaacttatgagctggaccac
cctggatttcaaattcgtgatagcaagggtctgcaaatagtggtttatggggtccagcga
ggattaggactggaagtttttccagttgaccttatatacagaccttggaaacatgcagaa
ggccagctctcattcattcagtattccctcattaacccagagatcttctgtttcgctgac
tatccctgtcatactgttgccacggatatcttgaaagcaccacctgaggatgataatcgt
gaaattgccacgtggaagagcctagatttaattgagtccctgttgcggttggcagaggtg
ggccagtatgaacaagtcaagcagctcttcagcttccctatcaagcactgtccagatatg
ttggtcttggctttgctacagatcaacacttcttggcatactttacggcatgaactcatc
tccacgcttatgcccattttccttggcaaccacccaaattctgctatcatcttgcattat
gcatggcatggacagggtcagtccccttcaattcgtcagctcatcatgcatgctatggca
gaatggtacatgagaggagaacagtatgaccaagcaaaattatcccgtattctagacgtg
gcccaagacttgaaggcgttgtctatgctgctgaatggtactccatttgcctttgttatt
gaccttgctgcccttgcctctcggcgggaatacctcaaactagacaaatggctcacagat
aaaattcgggagcatggggagcccttcatccaagcttgtatgactttcttgaagagaaga
tgtccctctatcttgggcggtcttgctccagagaaagaccagcccaaaagtgctcaactt
ccaccagagacactagcgacaatgctggcttgccttcaggcttgtgctggaagcgtatcg
caagagctctcagaaactattctcaccatggtagccaactgcagcaatgtggtgaacaaa
gccagacagccaccacctggtgtgatgcccaaaggtcgtccccccagtgctagtagtctg
gatgccatctcccctgtgcagattgatccacttgctgctgggatggcatctctcagttta
ggtggtccgaccgtacctcatacccagagtgtccctgggtttcctccaaacttgagttct
gcttttagtactcctcagtcaccagcaaaagcatttccgccactttccgcgcaaaaccag
aacacaccttttagcgggattggtggactctcttcgcagcttccagtaggtggtcttaca
acaggtagtctcggtatcggaactggggcccttggcctccctgcagtgaacaacgatccg
ttcgtgccaagaaaactgaacacatcaggactgaaccagcctacattccagcagagtaag
gtgaaaccttctgatttatctcaggtatggccagaggctaatcagcactttagcaaagag
attgatgatgaagccaacagctattttcagcgtatttataatcacccaccccaccccacc
atgtctgtagatgaggtattagaaatgctacagagatttaaggactctaacattaaacgg
gagcgagaagtatttaactgtatgctgaggaatttgtttgaagaataccgctttttcccc
caatatcctgataaggagctccacataacggcctgcctctttggtgggataattgagaag
ggattggtgacctatatggccctgggcctggccctgcgctatgtgcttgaagccttacgc
aagccttttacatccaaaatgtactattttggaattgctgcactagatagatttaaaaat
agattgaaggactaccctcagtattgtcagcacctggcttctattagtcactttatacag
ttccctcatcacctgcaggagtacattgaatatggacagcagtcaagagatcctccagta
aagatgcaggggtccatcaccacccctggaagtattgcactggcccaggcccaggcccaa
gcccaggccccagcaaaaactcctcttgctggccaggttagcactatagtaaccactgct
actaccaccaccactgtggcaaagacaacaattgctcctgtgggtcgagtcagcttcaag
aaagatgtgccaccttctattaatacaaccaatattgatactttgctagtggccacagat
caaacagaaaggattgtagaacctcctgaaaatgtgcaggaaaagattgcttttatcttc
aataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaaacggtaaaa
gaagaattcatgccttgggtttcacaatatcttgtgatgaagagagttagcattgagcca
aacttccatagtctctattcaaatttccttgacactcttaagaatccagaatttaataaa
atggttttgaatgaaacatacagaaatatcaaggtgctgcttacatcggataaagctgct
gccaacttctcagaccgttcattgctgaagaacctgggtcactggctgggaatgataacg
ttggctaagaataaacccatcttgcacacggacttggatgtcaaatccttgctgctagag
gcttacgtaaaaggacagcaggaactgctatatgttgtgccatttgttgccaaagtactg
gaatccagtgtaagaagtgtggttttcaggcctccaaatccatggaccatggcaattatg
aatgttcttgcagagcttcatcaggaacatgacttaaagctgaatctgaagtttgaaatt
gaagtgctctgcaaaaaccttgcccttgacatcaatgatctaaaacctggtagtctccta
aaagacaaggatcggttgaaaaacttggatgaacagttatctgctccaaagaaggatgta
aaacaagcagaagagctaccaccaattaccacttccactacttctacaacttcagctacc
agcactacgtgcacagcaactgttcctccccagccacagtacagttaccatgatatcaat
gtgtactccttgggagggctagctccacacattactctaaacccaactattcctctgttc
caagcccacccacagttaaagcagtgtgtgcgtcaagccatagagcgtgcagttcaagaa
cttgttcatccggtggtggaccgctcaattaaaattgccatgactacttgtgagcagata
gtgaggaaggattttgcgctagactcagaagagtcgcgcatgcgagtggcagcgcatcac
atgatgcggaacctgactgctggcatggctatgatcacctgcagggagcccttgctgatg
agcattgctaccaacctgaagaacagctttgccactgcattgcgggcagcttcaccacaa
cagagggagatgatggagcaggctgcagcccagctggctcaagataactgtgagttggcc
tgctgtttcattcagaaaacagcggtggaaaaagcgggtcctgaaatggataagaggctg
gccactgaatttgagctcagaaaacatgcccggcaagagggccgtaggtactgtgatcct
gttgttttgacttaccaggctgagcggatgccagaacagatcagattaaaggtgagaaac
ttcaacatgaagtcttcgacctgtgagcaagaaactacttggtgttaa
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