Paraclostridium bifermentans: KXZ80_03340
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Entry
KXZ80_03340 CDS
T07479
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KXZ80_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_03340
Enzymes [BR:
pbif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KXZ80_03340
DNA repair and recombination proteins [BR:
pbif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KXZ80_03340
Prokaryotic type
KXZ80_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UAG18756
LinkDB
All DBs
Position
683848..684522
Genome browser
AA seq
224 aa
AA seq
DB search
MVNIGNDWDEILKGEFEKPYYLKLREFLKEEYKNNIIYPDMHDIFNALKYTSYKDTKVLI
LGQDPYHGENQAHGLAFSVKPGVKTPPSLLNMYKELNSEFECFIPNNGFLVPWTKQGILL
LNTALTVRAHEANSHKGKGWETFTDHIIETLNLREDPVIFVLWGNNARSKKKLIDANKHY
IIESAHPSPLSASRGFFGSKPFSQVNDILIKLGKEPIDWQIPNI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggttaacataggaaacgattgggatgaaatattaaaaggtgaatttgaaaaaccatat
tatttgaaattaagagagtttttaaaagaggaatataaaaataatattatatatcctgat
atgcatgacatatttaatgcattgaaatatacatcatacaaagatactaaagtactaatc
ttgggtcaagatccttatcatggagaaaatcaagctcatgggcttgcattttcggtaaag
cctggggtaaaaacacctccgtctttattaaatatgtacaaggaattaaattcagaattt
gaatgctttatacctaataatggatttttagttccttggacaaaacaaggtatattacta
ttaaatacagctcttacagttagagctcatgaagcaaactctcataaaggaaaaggatgg
gagacttttacagatcatataatagagacattaaacttaagagaagatcctgtaatattt
gtcctatggggaaataatgctagaagcaagaaaaagttaatagacgcaaataaacattac
ataatagaatctgcacatccaagtccactatcagctagtagaggattttttggatctaaa
ccattttctcaggttaatgatatcttaattaaattaggaaaagagcctatagactggcaa
attccaaatatataa
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